Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1533 ATGCAAATCCATAAAGGCCTCAACAAAACCACCAATAAGTTTCCAGTTCATGAATGCAATGGTGTGCCTCACCATCTTCTAGATGTGAGAGAACCATTTGAGAACTTGTCACCCTCAGACTATCGCTTCATGGCTGAAACACTCATCTCAGAAATCAATGAACGGGGCAATATTCCGATCCTTGTTGGCGGTTCGAATTCATGGATTAACGCGCTCTTGGTTGAACAATACGATCCTGCGTCGAGCTTCATTTCCTCGGAGTTCAGGTACGAGTGTTGTTTTCTGTGGTTGGACGTGAAATCATCTGTTTTACTGGAGTATTCATCGAAGCGAGTTGATAAGCTGCTTGAGTCTGAAGATATACTCAGAGAATTGGCCGAGTTCTTCGACTCGAAAGTGAAGGATTTTGAGCTTGACTCAGTGCCCCGCACAGGGTTAAGGAAAGCCATCGGCGTCGCCGAGTTCGACCGGTATTTCAAAAAATATCCGCCGCCAGAAGGACTGAACAGAGATTGGAAGGGGAAAGAAGATATGGTGCGAAAGGCCGAATACGACGAGGCGGTGGATGCGGTAAAGAAGAACACGTTTCGACTAGTTGAGCGGCAGATGGAGAAGATTCAAAAGCTTAAAAAGGCAGGGTGGGACCTGCAGAGGCTTGATGCTACGGCGGTGTTTGAGGCGCGGGGGACATCTAAGGATGCTGAATGCACAAAGTTGCTGGACCGTAGCCTGGAGATTGTCGCGCCGTTTTTAAAGAAATGGATGAAAGAAAACAAAAAAGAAAGAGAAGAAATGGATTCATCTTGA 807 0.4659 MQIHKGLNKTTNKFPVHECNGVPHHLLDVREPFENLSPSDYRFMAETLISEINERGNIPILVGGSNSWINALLVEQYDPASSFISSEFRYECCFLWLDVKSSVLLEYSSKRVDKLLESEDILRELAEFFDSKVKDFELDSVPRTGLRKAIGVAEFDRYFKKYPPPEGLNRDWKGKEDMVRKAEYDEAVDAVKKNTFRLVERQMEKIQKLKKAGWDLQRLDATAVFEARGTSKDAECTKLLDRSLEIVAPFLKKWMKENKKEREEMDSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1533 268 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 101 216 - -
Glsi09g1533 268 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 234 IPR039657 -
Glsi09g1533 268 Gene3D - 1 251 IPR027417 -
Glsi09g1533 268 Pfam IPP transferase 87 204 - -
Glsi09g1533 268 Pfam IPP transferase 2 75 - -
Glsi09g1533 268 Coils Coil 251 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1533 Glsi-ChrGlsi09 11858892 11859698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1533 89 252 C2H2 Transcription Factor Family AT2G27760 26.374 5.20e-07 48.5