Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1528 ATGGGTCTCTTCTTCAACAACCTCCCTAAGGAATTCGTAGTTGTCATAATGGGAGCTACTGGCACTGGTAAATCCAACCTTTCCATTGAGCTTGCCATCCTCTTGTTAAAGGCATTCGGATTAGAGGCGGAAATAATCAACTGTGACAAAATGCAAGTCCATAAAGGCCTCAACATAACCACCAACAAGGTTCCAGTTGAGGAACGCAAAGGTGTGCCTCACCATCTTCTAGACGTGAAAGAACCATTTGAGGACTTGTCACCCTCAGACTATCGCTCCATGGCTGAACAGCTCATCTCACAAATCAATGAACAGGGTAAAATTCCAATTCTTGTTGGCGGTTCGAATTCGTGGATTCACGCACTCTTGGTTGAACGATACGATCCTGCGTCGAGCTGCTTTTCCTCGGAGTTGAGGTACCACTGCTGTTTTCTCTGGTTGGACGTGAAATCACCGGTATTATTGCAGTTTTCATCGGAGCGAGTTGATAAGCTGCTTGAGTCTAAAGATATACTGAAGGAGTTAGCCGAATTCTTCGACCCGGAAGCAAAAGATTTAGAGCTTGACTCAATGAGCCGCAAAGGATTGAGAAAAGCCATCGGCGTCGCGGAGTTCGACCAGTATTTCAAAAACTATGCACCGCCGGAAGCACTGAACAGAGAGTGGAAGGGGAAAGAAGAGATGCTGCGAAAGGCCGCATACGAGGAGGCTGTGGGTGCGGTGAAGGAGAACACTTGTCGGTTAGTTGAGCAGCAGATGAAGAAGATTCAAAAGCTTAAAGAGGCAGGTTGGGACCTACAGAGGCTTGATGCTACGGCGGCGTTTGAGGCGCGGGGAACGCCTAGGGAGGTTGAATGCATAAAGAAGTTGCTGGAACGTAGCCTGCAGATTCTCACGCCGTTTGCAGAGAAATTGGTGAAAGAAAAAGAAGAGAAGAAATGGATTCAGCTTGAGTCAGTCCTCACGTGA 969 0.4757 MGLFFNNLPKEFVVVIMGATGTGKSNLSIELAILLLKAFGLEAEIINCDKMQVHKGLNITTNKVPVEERKGVPHHLLDVKEPFEDLSPSDYRSMAEQLISQINEQGKIPILVGGSNSWIHALLVERYDPASSCFSSELRYHCCFLWLDVKSPVLLQFSSERVDKLLESKDILKELAEFFDPEAKDLELDSMSRKGLRKAIGVAEFDQYFKNYAPPEALNREWKGKEEMLRKAAYEEAVGAVKENTCRLVEQQMKKIQKLKEAGWDLQRLDATAAFEARGTPREVECIKKLLERSLQILTPFAEKLVKEKEEKKWIQLESVLT 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1528 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 131 IPR027417 -
Glsi09g1528 322 Gene3D - 10 293 IPR027417 -
Glsi09g1528 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 151 266 - -
Glsi09g1528 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 296 IPR039657 -
Glsi09g1528 322 Pfam IPP transferase 52 125 - -
Glsi09g1528 322 Pfam IPP transferase 137 254 - -
Glsi09g1528 322 Coils Coil 242 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1528 Glsi-ChrGlsi09 11761067 11762035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1528 139 272 C2H2 Transcription Factor Family AT2G27760 28.289 2.65e-08 53.1