Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1525 ATGCAACAACTCCTTAGTATCAACCTCTCCTCCCCCACCATTTCCCCCACATCCCTCTCCCTCTCTCTCTCTTTCCCTACCCTTTTCAATCCAATTCAATTCCCTCCCATGGAGGATCACTTTCACTACAACCAGACTAAAAAGCTCAACCCCACTTCCACCACAACTCGCTTAAAGCTCTTCGGCTTCAATGTCCATGAAGATTTAGAAGATGAACAAGACGTACTTGAAGATGTAGCAGATTCAATTGCCAACACCAAGCCCACCTCTTCCCCATCTGGGTCTCCGGATTCAGCTGCCGCCGATGCCGCCTGCGGCGGCGGCGGTGGTGGCGCTTTTCCTCCATCCTCCGGGGAAAGAAAATATGAGTGTCAGTATTGTTGCCGAGAGTTTGCAAATTCACAAGCACTTGGCGGGCATCAAAACGCGCACAAGAAGGAGCGTCAGCAGCTAAAGCGGGCTCAGTTACAAGCTACGAGAAGCGCCGCCGTTTCGTTTGTAAGGAATCCGATAATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTTGCTCCGCCGGGGCAAGTAGTGGTTCCGGCAGCTCCGGCTTCGTGGGTCTACGTGCCACCACGTGCCGCGCCATCTCCTTTCCACGTGTCTGTATCTCACGGGTGTGTTTTCCCGTCGGCGAATAGTACTGTTAATTATAGTTCCAGTAATAGTATTACAGGTGGGAGATCCACGGGTGCAGGGATGTTACCGTATGGTGGCGGTGTAGGGGATTCGTCATCCGCATTGTCATCCATGGGTGCACAGGTACTGGCCCGGGTCAACGGAAGAGTTGACGGACCTTCGTTGGGTAGGTTCTCTAAGGGGGATGTGGGGCCCAATTTTGACGATGCATTGGGCTTGGACTTGCATCTCAGCCTTGCGCCAGCTGCACCGTGA 924 0.54 MQQLLSINLSSPTISPTSLSLSLSFPTLFNPIQFPPMEDHFHYNQTKKLNPTSTTTRLKLFGFNVHEDLEDEQDVLEDVADSIANTKPTSSPSGSPDSAAADAACGGGGGGAFPPSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRSAAVSFVRNPIISAFAPPPHLLAPPGQVVVPAAPASWVYVPPRAAPSPFHVSVSHGCVFPSANSTVNYSSSNSITGGRSTGAGMLPYGGGVGDSSSALSSMGAQVLARVNGRVDGPSLGRFSKGDVGPNFDDALGLDLHLSLAPAAP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1525 307 PANTHER ZINC FINGER PROTEIN 5 47 306 IPR044299 GO:0010090
Glsi09g1525 307 SUPERFAMILY beta-beta-alpha zinc fingers 118 149 IPR036236 -
Glsi09g1525 307 MobiDBLite consensus disorder prediction 84 105 - -
Glsi09g1525 307 FunFam Zinc finger protein 6 115 172 - -
Glsi09g1525 307 ProSitePatterns Zinc finger C2H2 type domain signature. 124 144 IPR013087 -
Glsi09g1525 307 Gene3D Classic Zinc Finger 114 169 - -
Glsi09g1525 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 122 149 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1525 Glsi-ChrGlsi09 11711994 11712917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1525 53 305 C2H2 Transcription Factor Family AT1G68360 46.591 9.86e-56 179