LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi09g1503	ATGAGACTCAGCTGCAACGGGTGCCGCATTCTCCGAAAAGGTTGCAGCGACAACTGCACCATCAGACCCTGCCTCCAATGGATCAACTCCCCCGAATCCCAAGCCAACGCCACCCTCTTCCTAGCCAAATTCTATGGCCGCGCCGGCTTGCTCAACCTCATCAATGCCGCCCCCCAACACCTTCGTCCAGCTGTGTTCAAGTCTTTATTGTACGAGTCGTGTGGGAGAATTGTGAATCCGGTCTACGGGTCGATGGGGTTGTTCTGGACGGGGGAGTGGGCGCAGTGCCAAGCCGCGGTGGATGCGGCGCTGACGGGAATGGAGATTGGCAACGGCTTGGAGGTTTCTGATTGGCAAGGGAAGGAGACGGCGGCGACGCATGGGAGTGATCATGTGTTAGCGGCTTGCGATATACGCCACGTGTCTAGAGAGAGCCACGTGGAGAAGGAGAAGGGCGATGTGAACAAGGTGAAAGGGAGAGCCCGGTTCAAGAGGGGAGGCGAAGGTCCTAAAGGAAGAGGAGGAGAGAAAGTGAAAGTCATCAAACCCAAACCGCGAGTGGGCTGGGTTGACTCGTCGGCATTGTTTTGGAAACCGGTTCCCGATCACCGGTCGGAGAGCGAGAGCGTGTTCTCTGGTGAAACCGTTGAGGCTAGCTTGATGAACCGAGACGAATCGGAGCGGGAGCGTGGTGAGAATAACGAGAACCGAGTCGATGAACCTGGGATTGATTTAGATTTGACTCTAGGCCATGGCAATCTCATCAGATAG	771	0.559	MRLSCNGCRILRKGCSDNCTIRPCLQWINSPESQANATLFLAKFYGRAGLLNLINAAPQHLRPAVFKSLLYESCGRIVNPVYGSMGLFWTGEWAQCQAAVDAALTGMEIGNGLEVSDWQGKETAATHGSDHVLAACDIRHVSRESHVEKEKGDVNKVKGRARFKRGGEGPKGRGGEKVKVIKPKPRVGWVDSSALFWKPVPDHRSESESVFSGETVEASLMNRDESERERGENNENRVDEPGIDLDLTLGHGNLIR	256

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi09g1503	256	MobiDBLite	consensus disorder prediction	202	256	-	-
	Glsi09g1503	256	MobiDBLite	consensus disorder prediction	220	244	-	-
	Glsi09g1503	256	Pfam	Lateral organ boundaries (LOB) domain	4	103	IPR004883	-
	Glsi09g1503	256	ProSiteProfiles	LOB domain profile.	3	109	IPR004883	-
	Glsi09g1503	256	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 38	3	248	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi09g1503	Glsi-ChrGlsi09	11426025	11426942	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi09g1503	1	165	AS2 family	AT1G68510	58.382	6.37e-64	197

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Glsi09g1503		LOB	1.7e-23	No_clan