Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1484 ATGGCCACCGATGTCCGGGACTCCCGTCGCAAACACCAGCGATCGTCGTCTCCTGAGGAGGTTGAGAGATACTCGAAGCGCCACAAGCACCGGCACCATCCTCACCCCCGTGGTAGCATAAAACGCGAAGAAGAAAGAGAACGCGACGGAGAAACTGTTGCTGCAGTTCTTTCTTCACCACCCGCTCCTAATTTTGATGCGAATAACCATTTTCCTGGTTACGATGTGGAGGAGGGGGAGATTCTTGAAGAGGAGGGTTTTGGCGGTCGAGATGGTGAGATTGGGAAAGAGCAGACGCAATCTGATGCTGAGTCTGGTGAAATTAAGGTGATAGGAGATCGAGATGTTCGATCGGATAAGACAAATCTGGAACTTTTCACTGAAGAGTCTTGGTTGCATCGTGAAACTGCTGCCTCTTTTAAAGGCAGTGAAGGGATCAATGCTAAAATTTCAAAAACTGGAAGTGAGGGCATTAGCAATAATAAATTTAATGGTCTAGCATTGGATGGAGAAAAAGGGACATGCTGTCAGAGTCAAGTCATTCATATGATACATGAAGATTATGTTTCTCCCATTCGTTCAAGTGCTGAACCTCAGGATGGAAAGAACACTAGAGCTAGTGCACATGATCTGCGCAATGGATATTTGGATTCTATATCTTCCAAAGAGGATAAGAGGCAGCGTGGAGTCCTAGGATGTTTTAAAGGAAATGAGAAACTAAAGGACAACTATGATGAAGAAGGTCTGGATGTTGATGAGGGCAAAGTAAGCATCCATTGGAATTCATATTCTGATACAGGAGGAGAGAAATATAGGACCTCGGGAACTTCACCTTCTCATGATAGATATAGGAGTCGTTCAAGATCAAGTGATCATACAAGGGACAGGTCTTGTTCTCATAGTATAATGGAAGAATATGCTCATTCCAAGAGTAGGCACTCAGGGGAACAGGGTCCCCTTTCGTGGGCTGCTAGACATAAGGCTGAGTATGACCTCAGTGAGGAAAGAATAGTAGAATGCAGCAGAAAGCATGGACATGGCAATAGAGGTTTGGCAGTAGATGATAGAAGGGAACATGGTACCAGTTATCACAGTGGGGAGGCCCGAAGTAGAGATAGGAGTAAGGACAGGGATATGGGTAGGGACTTAAGAAGAGACAAGGAACAAGAAAGGAGCTGGAATCGGGATGATGACAAGGTGCATAGGAAGGAAAAAGAATATGAAAGGAGCCATAAGAGGGATAGAAGAGAAGGAGAAAAAAATAGGAGCAGGGGAAGAGAGGTGGATAGGGATAGGAGAAAAGAAAAGGAACGAGAAAGGAGCTGGGAGAGAGTGGTTGAAAGGGATAGGAGAAGGGAAAAGGAAAGAGATTGGAGTAGGGACAGAAAAAGGGGCAGCGAGAGAGATAGAGACTGGGAGAGTGAACAGGATGTTAAGAATCCAGGAAGGGATAAACTTGAGGAGAGGGATTGGGAGAGGCGATGCGATAGAAATAGGCACAAGGATAGAGCCATTGTGAATGGTAAGGATAAACATATGGTCCATGAGGATGGTCATGACAGTCGAGATAGATATAGACACTCTAGGCATTCAAGATATGAAGAAACGGAATGCCATCAAGAGAGAATAAGAAATGTTGAGCCTGCAAAGGTTTGTAACTCTATGGGAAACTCATTTGAAGGGGGTCAAAATAAAGTAGAAAGAGGTGAGGATGAACAAGATGACCTAGATGAGAAGGTTACATTGCTATTAGCTGAACAAGAAGAGGAAGATCTCAACAGAATTAAGGAGGAGAGTAGAAGGAGAAGGGAAGCAATCTTAGAGAAATACAAGAAGAAGAAGCAGCAGCAAGTAGAACAAACGCCTGAAAATGAAGAAAAAGGCAAAGAGTCTGTGGATATTCCTGCTCCTAATTTGGATGCTTCTGATGGTAAGAATGATGGTGTTAGTGTTCTTGACGTGGAAACATCATTTTCTGTTGAGAAACCTCCTCAGGAAAATGGGAATGCTGCTTCTGAAAATATCTCTGTTTCTGGGGGGCTTGGAGGTGGCAGTCCAAAGAGTGAGAGATCTGATGACAAGTTTTGTGATGATATATTTGGCGAGACACCTACTGGAGTTCAGAAATCGGGCAAAGGAGATGCTTTACAGATAGAGAGGGATGGTCTACATGACAATTGGGATGATGCAGAGGGGTACTACAACTATCGTGTTGGTGAAATACTTGATGGCCGATATGAAGTCACAGCTTCTCATGGGAGAGGGGTCTTTTCAACTGTTGTTCGAGCAAGGAACCTTAAGGCTGGTATTGGTGAGCCAGAAGAAGTAGCCATAAAAATTATTCGTAATAATGATACTATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTTTTTTCAAGTTTTAAGTACAGGAACCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCTGTGAGAGCATATGCAAAACAACTTTTTATTGCACTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGATAATATGTTGGTGAATGAGGCTAAAAATGTGCTGAAACTTTGTGACTTTGGCAGTGCCATGTTTGCTGGTAAGAATGAAGTTACACCATACCTTGTGAGTCGCTTTTACCGTGCCCCTGAAATAATACTTGGCTTGCCATATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAACTTTATACAGGGAAAGCTCTTTTTCCGGGTTCTACAAACAATGACATGCTTCGGCTGCACATGGAATTGAAAGGTCCTTTTTCCAAGAAGATGCTTCGTAAGGGGGAATTTATCGAACCACATTTTGACCAGGACCTGAATTTTCTTTCTACAGAAGAGGATCCAGTAACAAAGAAGATCCTAAAGAAGATGATTGTCAACATAAAGCCAAGAGATATTGGAACAATCATTACGGCCTCTCCTGGAGAGGATCCAAAGATGCTAGCCAACTTCAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTCTCTCAAGCATTGAGCCACCCATTCATCACGGGAAAATGA 3195 0.4297 MATDVRDSRRKHQRSSSPEEVERYSKRHKHRHHPHPRGSIKREEERERDGETVAAVLSSPPAPNFDANNHFPGYDVEEGEILEEEGFGGRDGEIGKEQTQSDAESGEIKVIGDRDVRSDKTNLELFTEESWLHRETAASFKGSEGINAKISKTGSEGISNNKFNGLALDGEKGTCCQSQVIHMIHEDYVSPIRSSAEPQDGKNTRASAHDLRNGYLDSISSKEDKRQRGVLGCFKGNEKLKDNYDEEGLDVDEGKVSIHWNSYSDTGGEKYRTSGTSPSHDRYRSRSRSSDHTRDRSCSHSIMEEYAHSKSRHSGEQGPLSWAARHKAEYDLSEERIVECSRKHGHGNRGLAVDDRREHGTSYHSGEARSRDRSKDRDMGRDLRRDKEQERSWNRDDDKVHRKEKEYERSHKRDRREGEKNRSRGREVDRDRRKEKERERSWERVVERDRRREKERDWSRDRKRGSERDRDWESEQDVKNPGRDKLEERDWERRCDRNRHKDRAIVNGKDKHMVHEDGHDSRDRYRHSRHSRYEETECHQERIRNVEPAKVCNSMGNSFEGGQNKVERGEDEQDDLDEKVTLLLAEQEEEDLNRIKEESRRRREAILEKYKKKKQQQVEQTPENEEKGKESVDIPAPNLDASDGKNDGVSVLDVETSFSVEKPPQENGNAASENISVSGGLGGGSPKSERSDDKFCDDIFGETPTGVQKSGKGDALQIERDGLHDNWDDAEGYYNYRVGEILDGRYEVTASHGRGVFSTVVRARNLKAGIGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFFSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGSAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYTGKALFPGSTNNDMLRLHMELKGPFSKKMLRKGEFIEPHFDQDLNFLSTEEDPVTKKILKKMIVNIKPRDIGTIITASPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALSHPFITGK 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 85 106 - -
Glsi09g1484 1064 ProSiteProfiles Protein kinase domain profile. 746 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 1 73 - -
Glsi09g1484 1064 Gene3D Phosphorylase Kinase; domain 1 716 805 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 608 633 - -
Glsi09g1484 1064 Coils Coil 582 616 - -
Glsi09g1484 1064 FunFam Serine/threonine-protein kinase PRP4 homolog 806 1062 - -
Glsi09g1484 1064 Pfam Protein kinase domain 747 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1484 1064 FunFam serine/threonine-protein kinase PRP4 homolog 716 805 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 341 546 - -
Glsi09g1484 1064 PANTHER DUAL SPECIFICITY PROTEIN KINASE 419 1062 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 275 299 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 660 681 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 341 577 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 38 52 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 608 693 - -
Glsi09g1484 1064 ProSitePatterns Serine/Threonine protein kinases active-site signature. 873 885 IPR008271 GO:0004672|GO:0006468
Glsi09g1484 1064 CDD STKc_PRP4 745 1061 IPR044092 GO:0004674|GO:0006468|GO:0045292
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 261 299 - -
Glsi09g1484 1064 SUPERFAMILY Protein kinase-like (PK-like) 733 1063 IPR011009 -
Glsi09g1484 1064 SMART serkin_6 746 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1484 1064 Gene3D Transferase(Phosphotransferase) domain 1 806 1062 - -
Glsi09g1484 1064 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1484 Glsi-ChrGlsi09 11248360 11255557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1484 753 1062 MAP Kinase Gene Family AT4G01370 34.169 8.38e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Glsi09g1484 Pkinase 5.4e-48 CL0016