Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1460 ATGGCTGGACCATCATGGTTGGTGGACAAAAGTAGAATAGCAACCAAAATAAAAAGTGCATCTGGAGCATGTGACCTTCAGAAGGCTATATGGAAAAGTAATCCTACCAGAGCTTGCCCAAATTGTCAATACATTATTGACAATAGTGAGGTAGCGCAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGACATAATATGTCACTTGCTTGCAAAAGTTGGTGCAGGAAATTCAAAACCCCATCCTTTCATTGATGAATTTATCACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCAAAACATTTACCAGGTGTTAATCAAGAGGGAAGTGCTTCCCACTTCTTCCATAGAGCAATCAAGGCTTATAATACCGGCACTAGAAAGCGTAGAAAAGTACATGGCCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAACCAGTCATGTTGGATGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTCTATATGAGCATTGTTAGAGGAGGAAAAGCTGAAAAGACTAACTGGGTTATGCATCAATATCACCTAGGAACAGAGGAGGATGAAAAACATGGGGAGTACGTTGTCTCTAAAGTATTTTACCAGCAGCAGCAAGTCAGATTAGGTGAAAAAGACCAGGATATCCCTGAAAGCACTGAAACTATCCAACCAATAACCTTGCTAGTGGATCCGGTCACCCCCAAATCAGTGACTCCCGATCCTCCTTGTAGTGAGAGACAACATTTGGACCTGGACTTGGGACAAGAATCACATCTCATTGCTCAGCGCACACACATGGATTGCGTAGGAGATGCAGTTCAGGCTGATTGTGAAGAGCCAAGAACTGATCTGTCCAATGTAGAAACTCAAAATAATGTGGGGACAGATAATAACGAAAACCGAGTAGATGAAGAACCGAAATGGTGGGATAGTGAGTTACAGCATCTGTTGGATTCACAACAACTTGTTGAAGCATTGTCCTTGTGTGATGATCTCCTTGACAGCCAGTCTCCAAAAAGGGATGGGGAAAATGGAGAACACAAGGACCAACCCAGTCTTTCTGTTTATGCTCAGCTAGGACCAGAGCATCTGAAGAAGGATATTGAAGAGTGCCAAAATCTTGTCCTTGATCCTGCAAATATAGAACTCGATACGCCTCCAGAGTTCCGACTAAGTCAGCTGGAATTCGGTTCACAGGATAGCTTCATTTCCTGGGGTGGCAACAAGGAGGCGGGCTGA 1281 0.4325 MAGPSWLVDKSRIATKIKSASGACDLQKAIWKSNPTRACPNCQYIIDNSEVAQEWPGLPKGVKFDPSDQDIICHLLAKVGAGNSKPHPFIDEFITTLEVDDGICYTHPKHLPGVNQEGSASHFFHRAIKAYNTGTRKRRKVHGQDFGDVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSIVRGGKAEKTNWVMHQYHLGTEEDEKHGEYVVSKVFYQQQQVRLGEKDQDIPESTETIQPITLLVDPVTPKSVTPDPPCSERQHLDLDLGQESHLIAQRTHMDCVGDAVQADCEEPRTDLSNVETQNNVGTDNNENRVDEEPKWWDSELQHLLDSQQLVEALSLCDDLLDSQSPKRDGENGEHKDQPSLSVYAQLGPEHLKKDIEECQNLVLDPANIELDTPPEFRLSQLEFGSQDSFISWGGNKEAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1460 426 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Glsi09g1460 426 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Glsi09g1460 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 386 IPR044799 GO:0003700
Glsi09g1460 426 FunFam NAC domain-containing protein 8 67 220 - -
Glsi09g1460 426 MobiDBLite consensus disorder prediction 295 316 - -
Glsi09g1460 426 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Glsi09g1460 426 MobiDBLite consensus disorder prediction 348 367 - -
Glsi09g1460 426 MobiDBLite consensus disorder prediction 348 362 - -
Glsi09g1460 426 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1460 Glsi-ChrGlsi09 11029137 11036454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1460 5 223 NAC Transcription Factor Family AT4G28500 52.000 1.05e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi09g1460 NAM 2.8e-20 No_clan