Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1444 ATGCCCCCTCAGCAAGAAACCGCTGTCACACCAAACATTTTGGCTGCCAGCTCCAACCGGCCGGAGAACAGCTCCGTCCACGCCGAACCATCCGGTTCTACCACTAATAACGTGAAACCCAGTTTGGATAATGGCATTCCCGTTCATCAGCAGCAGCAGCCACCTGTACTACCTGCAAGACTTTCCATTCTTCACCAATCCTTGCGTCCTGTTACCCTTAAATTTGAGGATGTTTCTTACAGTATAACCTTTGGGAGCAAAAAGCTTGGTTGTTTTTCTTCACAAGAACCGAAGCTAACGAGGGCGATACTCAATGGCGTGACGGGGATAGTCCGGCCTGGAGAGTTGCTGGCAATGCTGGGCCCATCAGGCAGTGGCAAGACCACCCTTCTCACCGCCCTTGGCGGTCGGCTTACAGGAAAAGTCTCTGGGACTATAACATACAATGGCCACTCTTTCTCTAGCTCCATGAAACGCAAGACCGGCTTTGTCTCACAAGATGATGTGTTATACCCTCACCTCACTGTGCTTGAGACGCTAGTTTACGCTGCTTTGTTAAGATTACCCAAAAGTCTTAGGAGAGAAGAGAAAATGGAGCAAGTTGAGATGATCATTGTGGAGCTTGGGTTAACGAGGTGCCGGAACAGCCCTGTGGGTGGTGCCACAGCCTTGTTTCGGGGCATTTCCGGTGGTGAGCGAAAACGGGTCAGTATTGGACAGGAGATGTTAGTGAACCCGAGTCTGTTATTGCTGGATGAACCGACCTCCGGTCTCGACTCAACTGCAGCTCAACGTGTCCTGTCAACGTTGAGGGGGCTGGCACGCGGGGGCCGGACGGTGGTGACCACTATTCATCAGCCTTCAAGCAGGTTGTATTGGATGTTTGACAAGGTTGTGGTATTATCGGACGGGTACCCGATTTACAGCGGAAAATCGGGTCGGGTTATGGAATATCTTGAGTCCATCGGTTATGTGCCCACTTTCAACTTCATGAACCCGGCTGATCTTCTGCTTGACCTTGCTAATGGCATAATTGGTGATGTTAAACAAGATGATCAGATAGACATCCATGGAAGCTTAGACCACATTGAAGATCAATCTTCAATCAAACAGTGCCTAGTTTTGTCCTATAAAAGAATTTTATATCCTGCTCTGAAAGAAGAGATTCGGCAAAATAATATAGACCCAATTGTTTTAACATCAGGAACACCTAGAAGCTCAAAGAACCAGTGGAACACTAGCTGGTGGGAGCAATTCAAGGTGCTGCTTAAGAGGGGTTTACAGGAGAGGAGACATGAATCTTATTCTGGGTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCTGGACTTCTTTGGTGGCATTCTAATCCCTCACACATACAAGATCAGGTAGGACTGCTTTTCTTCTTCTCAATCTTCTGGGGATTCTTCCCTCTATTCAATGCCATCTTTGCCTTCCCTCTGGAGAGGCCAATGCTGATAAAAGAAAGATCCTCAGGAATGTACCATCTCTCCTCCTACTATGTAGCCAGAATGGTAGGAGACTTGCCAATGGAACTAGTCCTTCCCACTATCTTTGTGACCATCACTTACTGGATGGGGGGCCTCAAGCCTTCACTGATCACCTTTGTTCTTACCCTCTTAATCATCATCCTCAATGTGCTAGTCTCCCAGGGAATAGGCCTAGCTCTAGGGGCCATTCTAATGGAAGTGAAGCAAGCCACAACCCTAGCTTCTGTGACCATGCTGGTGTTTCTGCTAGCTGGAGGCTACTACATTCAGAAAATTCCATCTTTCATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTTCTGGTTGGAGTTCAGTATAAAGAATTAGATGAAGTTTATGATTGTGGATTAGGGTTGCATTGTAGGGTAATGGATTTCCCTGCCATAAAATGTCTGCATCTTGATGGTTTGTGGGGAGATGTGGCTGCATTGGCTGTGATGCTGGTTGGATATAGAGTTGTGGCTTATGTAGCTTTGAGGATACGGCAGCCTCACTGA 2049 0.4705 MPPQQETAVTPNILAASSNRPENSSVHAEPSGSTTNNVKPSLDNGIPVHQQQQPPVLPARLSILHQSLRPVTLKFEDVSYSITFGSKKLGCFSSQEPKLTRAILNGVTGIVRPGELLAMLGPSGSGKTTLLTALGGRLTGKVSGTITYNGHSFSSSMKRKTGFVSQDDVLYPHLTVLETLVYAALLRLPKSLRREEKMEQVEMIIVELGLTRCRNSPVGGATALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRVLSTLRGLARGGRTVVTTIHQPSSRLYWMFDKVVVLSDGYPIYSGKSGRVMEYLESIGYVPTFNFMNPADLLLDLANGIIGDVKQDDQIDIHGSLDHIEDQSSIKQCLVLSYKRILYPALKEEIRQNNIDPIVLTSGTPRSSKNQWNTSWWEQFKVLLKRGLQERRHESYSGLRIFQVLSVSILSGLLWWHSNPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLITFVLTLLIIILNVLVSQGIGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQKIPSFIAWLKYISFSHYCYKLLVGVQYKELDEVYDCGLGLHCRVMDFPAIKCLHLDGLWGDVAALAVMLVGYRVVAYVALRIRQPH 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1444 682 Gene3D - 73 323 IPR027417 -
Glsi09g1444 682 MobiDBLite consensus disorder prediction 1 52 - -
Glsi09g1444 682 CDD ABCG_EPDR 70 310 - -
Glsi09g1444 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 328 IPR003439 GO:0005524
Glsi09g1444 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 673 - -
Glsi09g1444 682 SMART AAA_5 113 306 IPR003593 GO:0016887
Glsi09g1444 682 FunFam ABC transporter G family member 22 91 322 - -
Glsi09g1444 682 Pfam ABC-2 type transporter 285 348 IPR043926 GO:0140359
Glsi09g1444 682 Pfam ABC transporter 104 256 IPR003439 GO:0005524
Glsi09g1444 682 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Glsi09g1444 682 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524|GO:0016887
Glsi09g1444 682 MobiDBLite consensus disorder prediction 7 52 - -
Glsi09g1444 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1444 Glsi-ChrGlsi09 10836161 10840619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1444 103 304 Calmodulin-binding Proteins AT2G36910 30.516 1.33e-11 66.2