Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1437 ATGAGGGATGGAAGAAGAAGGAAGCTGCATTTTAGCAAGATCTACTCATTTCCACGCGGTAAAACATCATTCAAGGAAGATCATTCCCAGATTGGGAGGCGAGGTTATTCCAGGGTAGTCTTCTGCAATGAACCAGATAGCCTTGAGGCTGGAATTAGGAATTATGCAGACAATTCTGTTAGTTCTACCAAATACAATATTGCTACTTTCTTGCCCAAATCACTGTTTGAGCAGTTTAGGAGAGTGGCTAATTTCTATTTCTTAGTTACTGGCATCTTATCCTTCACCAAACTTGCTCCCTATACAGCTGTGAGTGCTATCCTTCCCCTGATTATCATTATTGGGGCAACTATGGTGAAAGAAGGTATTGAAGATTGGCGTCGGAAACAGCAGGATATGGAGATGAACAATAGACGAGTTAAAGTGCACAAGGGTGATGGTATTTTCGAATATACCGAGTGGAAGAATCTGAGGGTAGGGGATATAGTGAAGGTAGAGAAGGATGAATTCTTTCCAGCAGACCTCCTATTGCTTTCATCGAGTTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTAAAGTTAAAACAAGGGCTGGAGTTAACTTCTTCCTTACAAGAGGATATTAACTTCCAGGACTTTAAAGCTACAGTAAAATGTGAGGACCCGAATGCGAATTTGTACTCTTTTATTGGGAGCTTAGATTTTGAAGAGCAACAATATCCCCTTTCTCCTCCGCAACTTCTTCTGAGAGACTCTAAACTCCGTAATACAACCTACATATTTGGAGCTGTCATCTTCACTGGTCAGGACACCAAGGTTATACAAAATTCAACTGATCCCCCTTCAAAGAGAAGCAAGATTGAGAAGAAGATGGATAAAATAATCTACTTCTTGTTTTGCATTCTATTTTTATTGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTAAAGATGACTTGGAAAATGGGTTGATGAAAAGATGGTATCTGAGACCAGATGATTCTACAATTTTCTTTGATCCAAAAAGAGCACCAGCAGCTGCAATATTTCATTGTTTGACAGCCTTAATGTTATATGGCTTCTTTATTCCGATCTCCTTGTATGTGTCAATAGAAATTGTAAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAGGAAGCAGACAAACCTGCTCATGCCCGTACTTCAAACTTGAATGAAGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCAGTTGCTGGTGTGGCTTATGGCCATGGTGTTACAGAGGTTGAAAAGGCTATGGGTAGAAGAAAAGGCTCATCTTTGAGTTATGAACATGTTAATGGGTCAGAATTAGATGACATCAGGGATTCTACTGATACAAAAGCACCCATCAAAGGTTTTAATTTTACAGATGAAAGGATAATGAATGGGAACTGGGTTCATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCTTGTTAGCAATCTGTCATACAGCCATACCTGAGGTGGATGAAGATGCAGGAAAGGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTTATTGCAGCTAGAGAACTTGGCTTCGAGTTCTACAACAGGACTCAGACTAGCTTGTCAATGTATGAGTTAGATCTAGGTTCTGGCCGGAAAGTTGACAGGACGTACAAACTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCGGTAATAGTGAGAGATGAAGAGGGAAAAATTTTGCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACTATGGAGCATGTGCAAGAATATGCTGATGCAGGTCTAAGGACCCTGATACTAGCCTATCGTGAACTAGATGAAGAAGAATACAAGGAGTTCGATGAGAAATTTTCTGAGGCAAAAAATTCAGTTAGTGAAGATCAGGAAACACTAATTGATGAAATTTCAGATAAGATCGAGAGGAATCTAATCCTTCTTGGTGCCACTGCAGTAGAGGACAAACTCCAAAATGGGGTTCCTGATTGCATTGACAAGCTTGCTCAAGCAGGAATCAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTCGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATCTGGAGACTCCGGAAATTCAAGCATTGGAGAAGGAAGGGGAAAAGGTTGCCATTGCCAAGGCATCAAGAGAAAGTGTCCACCGTCAGATATCAGAAGGTGCTTCGCTGCTAGCTGCATCCAGGAGGACCTCTCAGCCAGCATTTGCTCTGATTATCGATGGAAAATCACTTGCTTATGCTCTAAATGATGAAATGAAGAACATGTTTCTGGAACTAGCAATTAAATGCGCATCTGTTATCTGCTGTCGCTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTTAAATCTGGAACTGGAAAAACAACATTAGCTATTGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAGGCAGATATAGGGATTGGAATCAGTGGAGTTGAAGGAATGCAGGCTGTCATGTCTAGTGATATTGCAATTGCACAGTTCCGATATTTGGAACGATTACTTCTCGTGCATGGACATTGGTGTTACCGGAGGATATCGTCAATGATATGTTATTTTTTCTACAAGAGTATCACATTTGGCTTCACTTTATTCTTATATGAGGTGTATGCCTCATTTTCTGGAGAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCGTCACTTCCTGTGATTGCCCTTGGTGTATTTGACCAGGATGTTTCTGCCCGGTACTGTCTTAAATTTCCTTTGCTATATCAAGAAGGAGTACAAAATGTCCTCTTTAGTTGGCGCCGAATACTCAGCTGGATGCTTAATGGATTTATTAGTGCCATAATAATCTTCTTCTTCTGCACGAAAGCAATGGAGCTTCAGGCCTTCGATAAGGCAGGAAGAACTGCCGGGAGAGATATACTGGGAGCAACAATGTACACTTGTGTTGTTTGGGTTGTAAACTTGCAAATGGCACTTGCCATAAACTACTTCACCTTGATACAACATATTTTCATTTGGGGAACCATTGCATTCTGGTATCTCTTCCTCGTGGCATATGGAGCAATGTCTCCTACATTCTCTAAAAATGCCTACAAAGTCTTCATTGAAACCCTTGCTCCATCTCCTTCCTTTTGGCTTGTGACATTTTTCGTGGTGATTGCAACTCTTACACCATACTTCTTATACTCAGCAATTCAGATGCGGTTCTTCCCAATGTATCATGAGATGGTACAATGGGTAAGACATGAAGGGAAGACAAATGATCCTGCATTCTGTGAAATGGTCCGGCAGAGGTCATTGCGCCCTACAACTGTGGGTTCAACAGCACGCGTAGCAGCTAATGAGGCCAACCACATGGAAAACAGAACTTTTAACTATAGATAA 3603 0.4097 MRDGRRRKLHFSKIYSFPRGKTSFKEDHSQIGRRGYSRVVFCNEPDSLEAGIRNYADNSVSSTKYNIATFLPKSLFEQFRRVANFYFLVTGILSFTKLAPYTAVSAILPLIIIIGATMVKEGIEDWRRKQQDMEMNNRRVKVHKGDGIFEYTEWKNLRVGDIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLELTSSLQEDINFQDFKATVKCEDPNANLYSFIGSLDFEEQQYPLSPPQLLLRDSKLRNTTYIFGAVIFTGQDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCILFLLAFVGSIFFGIATKDDLENGLMKRWYLRPDDSTIFFDPKRAPAAAIFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGHGVTEVEKAMGRRKGSSLSYEHVNGSELDDIRDSTDTKAPIKGFNFTDERIMNGNWVHEPHADVIQKFFRLLAICHTAIPEVDEDAGKVSYEAESPDEAAFVIAARELGFEFYNRTQTSLSMYELDLGSGRKVDRTYKLLNVLEFNSSRKRMSVIVRDEEGKILLLCKGADSVMFERLAKNGREFEEKTMEHVQEYADAGLRTLILAYRELDEEEYKEFDEKFSEAKNSVSEDQETLIDEISDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQALEKEGEKVAIAKASRESVHRQISEGASLLAASRRTSQPAFALIIDGKSLAYALNDEMKNMFLELAIKCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKSITFGFTLFLYEVYASFSGEPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISAIIIFFFCTKAMELQAFDKAGRTAGRDILGATMYTCVVWVVNLQMALAINYFTLIQHIFIWGTIAFWYLFLVAYGAMSPTFSKNAYKVFIETLAPSPSFWLVTFFVVIATLTPYFLYSAIQMRFFPMYHEMVQWVRHEGKTNDPAFCEMVRQRSLRPTTVGSTARVAANEANHMENRTFNYR 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1437 1200 NCBIfam HAD-IC family P-type ATPase 834 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi09g1437 1200 FunFam Phospholipid-transporting ATPase 116 286 - -
Glsi09g1437 1200 Pfam Cation transport ATPase (P-type) 537 627 - -
Glsi09g1437 1200 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1155 - -
Glsi09g1437 1200 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1144 IPR023298 -
Glsi09g1437 1200 SFLD C1.7: P-type atpase like 406 917 - -
Glsi09g1437 1200 FunFam Phospholipid-transporting ATPase 543 701 - -
Glsi09g1437 1200 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Glsi09g1437 1200 Gene3D - 545 700 IPR023299 GO:0000166
Glsi09g1437 1200 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Glsi09g1437 1200 FunFam Phospholipid-transporting ATPase 701 906 - -
Glsi09g1437 1200 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Glsi09g1437 1200 Gene3D - 116 286 - -
Glsi09g1437 1200 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 702 IPR023299 GO:0000166
Glsi09g1437 1200 CDD P-type_ATPase_APLT_Dnf-like 57 1015 - -
Glsi09g1437 1200 SFLD p-type atpase 406 917 IPR044492 -
Glsi09g1437 1200 Gene3D - 701 906 IPR023214 -
Glsi09g1437 1200 NCBIfam phospholipid-translocating P-type ATPase 55 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi09g1437 1200 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Glsi09g1437 1200 SUPERFAMILY HAD-like 412 910 IPR036412 -
Glsi09g1437 1200 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Glsi09g1437 1200 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1437 Glsi-ChrGlsi09 10760212 10766810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1437 9 1188 Primary Pumps ATPases AT1G68710 74.896 0.0 1916