Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1426 ATGCTGCTGAAACTAGGGATCCTACTACTAAAGAAAGGCATTGGCTTGGCGCTTTTGACACTGCTCAAGAAGCTGCTCAAGAAACAGGGTTGGTTGGCACTGTTTTGTCGTTCTATGGTCGCATCTGCTCCTACCTTCTGCAAGTCCCATCTCGTCTTTCAAGCTTGGAGGACGTCACTCGAGATCGTTTCCCATAAAATCTCCTCTGCGTACTTGGAGGATGTTATTCCCCCAGTAAACACTGCCTTTTGGAATACACTAGTCCCTTGGCTTAGCACTTTTGACACTGCTCGAGAAGCTGCTCTTGCTTATGACAGAGCTGCTTTGTCCATGAAAGGACGCCAAATATTCTACGATTGTTGCCGAGGACTGAATGTTCTAATGGAATCTAAAGGTGGGAAGAAGTCTAGTAGTAGTAGTAAATCCGTGTTCTACGAAGCTCCTCTTGGCTACAGCATTGAAGACGTTCGTCCAAACGGTGAAATCTTGAAGTTCAGATCTGCTGCTTACTCCTACTGCGCTCGCAAACCATCCTGA 537 0.4655 MLLKLGILLLKKGIGLALLTLLKKLLKKQGWLALFCRSMVASAPTFCKSHLVFQAWRTSLEIVSHKISSAYLEDVIPPVNTAFWNTLVPWLSTFDTAREAALAYDRAALSMKGRQIFYDCCRGLNVLMESKGGKKSSSSSKSVFYEAPLGYSIEDVRPNGEILKFRSAAYSYCARKPS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1426 178 PANTHER BNAA05G33520D PROTEIN 91 178 - -
Glsi09g1426 178 Pfam S-adenosyl-l-methionine decarboxylase leader peptide 128 178 IPR012511 -
Glsi09g1426 178 ProSiteProfiles AP2/ERF domain profile. 55 127 IPR001471 GO:0003700|GO:0006355
Glsi09g1426 178 Gene3D AP2/ERF domain 80 119 IPR036955 GO:0003700|GO:0006355
Glsi09g1426 178 SUPERFAMILY DNA-binding domain 85 117 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1426 Glsi-ChrGlsi09 10685012 10691387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1426 90 115 AP2-EREBP Transcription Factor Family AT5G18560 84.615 2.80e-08 50.4