Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1422 ATGGCCAGCCGCCTGGCAGTTGTTGCTGAACTCACTGAGAGAGCCTCGGAGATTATGATTCATTCAATGGAAGAAGATACTTCTGGTGCTGATTCACATAACAAACACTCTGGTCTCTTAAAGGATCAAGTTTGTTTGGTTAAAAGGAAAGACTCTGAGAACCATGAGATTGCTCCAATCCAAGATCAACTATCATTTGAGAAGGGTTTCCTTATTGTAATCCGTGCATGCCAATTGTTGTCCCAAACGAATGATGGAATAATTATTGTAGGGTTGGCGGGTCCTTCAGGGGCTGGGAAGACTGTGTTCACTGAAAAAATACTCAACTTCATGCCCAGCGTTGCGGTTATTTCAATGGACAATTATAACGATTCCAGCCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACAGACTATGACACGTTGCTCCAGAATGTACATGATTTAAAGGCAGGAAAGCCAGTCCAGGTTCCAATCTATGATTTCAAGTCCAGCTCACGTACAGGATACAGGACAATTGAAGTCCCGAGTTCCAAAATTGTGATCATTGAGGGTATCTATGCTTTGAGTGAGAGGTTGCGACCTTTATTGGACCTTCGAGTATCTGTCACAGGTGGAGTTCATTTTGACCTTGTCAAACGAGTATTACGTGACATTCAACGTGCTGGTCAACAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAAGCCTTTATTGAGCCAGATCTTCAGACAGCTCATATCAAAATCATCAACAAGTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTAAAATCAGCAAGGAATGTGACAGTGGATCAAATTAAAGCTGCTCTCTCTGAAGATTGTAAGGAAACAACTGAGCAGATTTATGACATATATCTTCTACCACCGGGTGAAGATCCAGAAACTTGCCAATCATATTTACGGATGCGGAATAAGGAGGGGAAATACTGTCTAATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTTAGTGTGCGGCTCCTTGGTGGACTAATGGCCCTGGGATACACGATAGCTACCATCCTTAAAAGAAACAGCCATGTATTCTCTGATGACAGGGTTTGTGTGAAACTTGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTGCAAGGAAGAGATCGCCTAATTGTAAAATTCATAGCCCAGCAGCTCAGTATGGAAGGTTCATACATTGCTCGTACCTACATTGAGCAAATCCAACTTGAGAAGATTGTAAATGAGGTTATGGCCCTTCCAGATGATTTAAAAACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAAAGCCTTTGCAGACAAGGTTTCCATCAGAAACACGCATATGAGGAGTGGTATGTCACAGTCGTATACAAACCAAGGGGAGCAAAATCTACTCAAACCTTCTGGATATGGTGCCAGCAATCGAGGTTTTGGTGAAAGAAATCCAGATTCCTCCACAACAGTAGCAAACCAGCTTTCAGAACAAATTTCTTCCCTCAATGAGAGAATGGATGAGTTTACAAATCGTATTGAAGAGCTGAACTCCAAGTTAAACATAAAAAAAAATTCTCCAAGCCAAAAAAATATGGCACTCCAAGGTGAAGCTTGCAACGGTTCTGCTTCCACCTCTTACTTTGTCACTAGTTTGGGAAGTGGTTCCCTAACTGGATCTATAATGCCAAATTCCTCGTCTTCATCACAATTAGCTAAAGAGTCACCTTTAATGGATGAGGTATCAGGTATTGCACGGGGACAGCGCCAGATCATGCATCAATTAGACAACCTCAACAATCTTCTCCGGGGGAGCTTAGGGGACAGGTCTTACCAAACAAGAACCAACAGGAAAAGCATGGCTGCTGCTTCAGAATCCACTTCAGCTCGTGTCATGGCTGCAGTGGCTTTTGGTTGTTTGGGGATCTTCTTGATGAGGGGTTCCTTGACTCGAAATTGA 2043 0.4214 MASRLAVVAELTERASEIMIHSMEEDTSGADSHNKHSGLLKDQVCLVKRKDSENHEIAPIQDQLSFEKGFLIVIRACQLLSQTNDGIIIVGLAGPSGAGKTVFTEKILNFMPSVAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKPVQVPIYDFKSSSRTGYRTIEVPSSKIVIIEGIYALSERLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQQPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARNVTVDQIKAALSEDCKETTEQIYDIYLLPPGEDPETCQSYLRMRNKEGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLIVKFIAQQLSMEGSYIARTYIEQIQLEKIVNEVMALPDDLKTKLSLDEDLVSSPKEALSKAFADKVSIRNTHMRSGMSQSYTNQGEQNLLKPSGYGASNRGFGERNPDSSTTVANQLSEQISSLNERMDEFTNRIEELNSKLNIKKNSPSQKNMALQGEACNGSASTSYFVTSLGSGSLTGSIMPNSSSSSQLAKESPLMDEVSGIARGQRQIMHQLDNLNNLLRGSLGDRSYQTRTNRKSMAAASESTSARVMAAVAFGCLGIFLMRGSLTRN 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1422 680 Gene3D - 88 288 IPR027417 -
Glsi09g1422 680 Coils Coil 520 554 - -
Glsi09g1422 680 PANTHER URIDINE KINASE 56 445 - -
Glsi09g1422 680 ProSiteProfiles CYTH domain profile. 270 432 IPR023577 -
Glsi09g1422 680 PRINTS Uridine kinase signature 87 104 - -
Glsi09g1422 680 PRINTS Uridine kinase signature 246 259 - -
Glsi09g1422 680 PRINTS Uridine kinase signature 154 169 - -
Glsi09g1422 680 PRINTS Uridine kinase signature 210 220 - -
Glsi09g1422 680 MobiDBLite consensus disorder prediction 482 519 - -
Glsi09g1422 680 CDD UMPK_like 89 261 - -
Glsi09g1422 680 SUPERFAMILY CYTH-like phosphatases 283 429 IPR033469 -
Glsi09g1422 680 Pfam Phosphoribulokinase / Uridine kinase family 89 258 IPR006083 GO:0005524|GO:0016301
Glsi09g1422 680 Pfam CYTH domain 288 426 IPR023577 -
Glsi09g1422 680 MobiDBLite consensus disorder prediction 482 500 - -
Glsi09g1422 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 258 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1422 Glsi-ChrGlsi09 10655935 10665354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1422 88 258 PRT Gene Family AT5G40870 28.889 7.17e-19 88.6