Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1382 ATGGCTTTTATTTCGGAGGTTGCCATGACATTCTCTCACTACATGGATGATGAATATGAGAAACTCTTCCGAAGAGTGAACCCACCCAGGGTTGTAATTGATAATGAAGCTTGCAAGAATGCCACTGTCATAAGGGTTGATAGTGCAAACAAGTATGGAATACTTCTTGAAGTCGTGCAAATCCTCACTGATCTAAACCTTATCATAACCAAGGCTTACATATCTTCTGATGGGGGATGGTTCATGGATGTTTTTCATGTCACCGACCAAGATGGAAATAAGGTTACAGATGAAGCTATTTTGGATTACATTCGAAAGTATCTTGGTCCGGAGTCTTGCTTTACATCTTCCATGAGATCTGTTGGGGTCAAGCAATCAATGGACCATACTGCAATAGAGCTAATGGGAACTGATAGGCCAGGATTGCTTTCAGAAGTGAGCGCTGTATTGACCAACCTCAAGTGCAATATAGTGAACGCGGAGGTCTGGACCCACAATACGCGTGTAGCAGCTGTGATGCACGTAAATGATGAAGAAACAGGTTCTGCTATCACTGACCCAGACAGGCTATCTCTAATCAAGGAGCTCCTGTGCAATTTACTTGGTGGTGGCAACAAAAATAGGAGAGCCAAGACTGTTGTAACTGACGAAGCCACCCATACTGATCGAAGGCTTCACCAGATGATGTTTGCTGATAGAGACTACGAACGAGATGATGGTGACGACGACGACTTTGATGAGAAGCAAAGACCAAATGTGAATGTTGTTAATTGGTCTGACAAAGATTACTCAGTAGTTACCATCCAATGCAAGGATAGGCCAAAGCTTCTTTTCGACACAGTTTGTACTTTGACAGATATGCAGTATGTGGTTTTTCATGCAAATATCGATGCTGGGGGACCAGAAGCATATCAGGAATATTACATCAAACACATTGATGGATCCCCTGTGAAATCAGATGCAGAAAGACAAAGAGTGATACAGTGTCTTGAAGCTGCCATTGAGAGAAGAGTATCTGAGGGGTTGAAGCTAGAGCTTTGCAGCACCGACAGAGTTGGACTGCTATCTGATGTCACACGGATATTCAGAGAGAACAGCCTTACTGTCACCAGAGCAGAAGTGTCCACCAAAGGAGGCAAAGCTGTGAACACTTTCTATGTTCGTGGTGCTTCTCGTTGCCCTGTTGATTCCAAGACCATAGAATCCATTCGCCAATCAATTGGCAACACCATTCTGAAAGTAAAGGGAAACCCAGAAGCTTCAAAGCCTGCTCCCCAGGATTCTCCAACCAGATTCCTCTTTGGTGGCCTTTTCAAGTCCAGATCCTTCGTAAACTTCGGCTTGGTTAAGTCATATTCTTGA 1362 0.4383 MAFISEVAMTFSHYMDDEYEKLFRRVNPPRVVIDNEACKNATVIRVDSANKYGILLEVVQILTDLNLIITKAYISSDGGWFMDVFHVTDQDGNKVTDEAILDYIRKYLGPESCFTSSMRSVGVKQSMDHTAIELMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRVAAVMHVNDEETGSAITDPDRLSLIKELLCNLLGGGNKNRRAKTVVTDEATHTDRRLHQMMFADRDYERDDGDDDDFDEKQRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAGGPEAYQEYYIKHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCSTDRVGLLSDVTRIFRENSLTVTRAEVSTKGGKAVNTFYVRGASRCPVDSKTIESIRQSIGNTILKVKGNPEASKPAPQDSPTRFLFGGLFKSRSFVNFGLVKSYS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1382 453 CDD ACT_ACR_2 130 203 - -
Glsi09g1382 453 SUPERFAMILY ACT-like 126 200 IPR045865 -
Glsi09g1382 453 Gene3D - 126 199 - -
Glsi09g1382 453 SUPERFAMILY ACT-like 38 108 IPR045865 -
Glsi09g1382 453 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 14 416 IPR040217 -
Glsi09g1382 453 Pfam ACT domain 132 182 IPR002912 -
Glsi09g1382 453 Pfam ACT domain 42 102 IPR002912 -
Glsi09g1382 453 CDD ACT_ACR_3 263 337 - -
Glsi09g1382 453 CDD ACT_ACR_1 41 111 - -
Glsi09g1382 453 ProSiteProfiles ACT domain profile. 131 211 IPR002912 -
Glsi09g1382 453 ProSiteProfiles ACT domain profile. 343 422 IPR002912 -
Glsi09g1382 453 ProSiteProfiles ACT domain profile. 43 123 IPR002912 -
Glsi09g1382 453 SUPERFAMILY ACT-like 339 408 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1382 Glsi-ChrGlsi09 10186440 10189465 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1382 09 10186440 10189465 Glsi09g1382 09 10186440 10189465 ECH