Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1377 ATGAATACTTGCTCTTCTTCTCTATACATCATTTTGTTTCTACTTCTTCAACTCTTGAATCTGCAAATTGCTTTTGCTAAAAATACCAGTTATTCTCCCTTGGAAAACATTGCTCTCAACTGTGGCACTAAGTCAACAGAAGTTGTTGCATATGAGGGAAGGAACTGGAATGGCGATGCAGGTTCAAAGTATTTAACCTTTAATACCGACACAAGGTCCCTGATAGCCAAAGCCCCAATGACTCTTGAATCTGTTCCTGAAATTCCTTACTTGACTGCTCGAATCTTTAAGTCTCAACTCACCTACAGGTTCAAAGTGACCCCAGGTCCAAAATTCATCCGCCTTCACTTCTACCCAACTTCTTACTTGGGTCTCAATGTCTCCAATGCTTTTGTATCGGTCACTGCTGGTAACTTCACTCTGCTGCATAACTTCAGTGTTTCCCTCACTACTGATTACTTAAACTGGGCATATGTGATGAAAGAGTACATCGTCCATGTAAGTGGAAGAACTTTGGAACTTACTTTCAGTCCATCATCTAATGCTTCTGATGCCTATGCATTCGTGAACGGAATCGAAGTTGTTTCCATGCCTTCTAATCTCTATATTCGGGGTAATAATGCTCCTCTTCCATTAGTTGGTCATGATCCTGTGCTGTGTTATATTTACAACAGTTCTGCCTTGGAAAACATGTACAGAGTAAATGTAGGAGGCGACGAAATTGCAGCCAAGTATGATACGGGAATGTTCCGCACTTGGACCACAGATGTAGATAACTCATTTGGAGGTTCATTAGACAATGAACCCACTGATATGAACGTGCCAATTCTGTATACAACTGCTGTTCCATCATATACTGCACCGGAAGGTGTCTACCGCACAGCCAGTCAAATGGCATCCTTTGTTGATGGCCTTGTCAACTTAAACTATAATCTATCGTGGTTCTTTCAGATCGATTCTGGTTTCAGTTATCTCGTTAGGTTGCACTTTTGTGATGTTCTCCGAGACATAAATTTGGTGAATCAGGTAGTTTTTACGATATATTTGAATAATCAAACAGCTGAAGATCAGTTTGATGTAGTTGCCTTTGGTGGCCGTGGAGTTCCTATATACCAAGACTACGTTGTGATGGTTCCGGAAGCAAGCGAGGTAAAGCAGGATCTTTGGCTAGATCTTCATGCAAATGTGAAAACAAAACCTCAGTATTACACTGCTTTCTTGAATGGAGTGGAGATCTTTAAGCTGAGCAATGCTGATGGAAATCTTGCAGGGATTAATTCTGTCATGAACAAGTCTAAGTCAGCTGTGCGAGTGCCCCAAGTTGCAGTGTCTAAAAGGACAAAGAAAATCAAATTCATTGTCATTGGATGTGGACTGGGTGCGGGGGCACTAGCACTACCTATTCTCCTATGCTTGATTGGTTGCAGGTTGAAGTTAACTAGGCCAAGTAGGACATCATGGTGTGGTCTCCCTATTCTTACTCCTAATCATATAAAAAAGGTTAGCAAGTCTTTACGCCACCAATTTTCCATGGACGAGATTAGAGCGACAACAAATAACTTTGATGAGGCTCTAGTCATTGGCATTGGCGGGTTTGGAAAAGTTTATAAGGGTAGTTTTGATGGTGGGTCTACCTTCGTAGCCATAAAGCGCAGCAATCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGAGAGAGATCCATATGCTCTCCCAGCTGCGCCATCACAACCTTGTTTCCCTAATGGGTTATTGCCAAGAAGATGGGGAGATGATACTGGCTTATGAGTTTATGGCCAACGGGACACTATTTGACCATCTTCACTTGAGGCAGATGGAAGAACTCCATTTGTCATGGACTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTACACTACCTACACACTGGCACTGAACACAGGATCATCCACCGTGACATCAAGACAAGCAATATACTCCTAGACCAGAACTGGAAGGCCAAAATTTCTGACTTCGGCTTGTCAAAGGAAAGCAACTCAGCCTTGGTCAGTACCAACGTCAAGGGCAGTGTTGGATACTTAGATCCAGAGTACTTTCGATGTCATAAGTTGACTGAGAAATCTGATGTATATTCATTTGGGGTGGTGTTAATGGAGGTGGTAAGTGCAAGGCCTGCTGTGAGTCCAGTTGAAGATGATGAGCATGGTATCTTGGCCGACTGGGCTCTGCACTGCTATGAGAATGGTATTATAGCTCAACTGGTGGACCCTGACTTGGAAGGAATGATAGACGCAGATTGTTTTGAGATATATTTAGGGGTGGCCCATAAATGTTTAGCCGAAAAAGGGTTGGAGCGCCCCCCCATGGGTGATGTGCTGCAGAGCCTCGAACTGGCATTGCAGCTTCAGAAAAATGCCAATATGGCACCAGGTAGAGATGTAAACAGAACAGAAAATACTGGTTCGAAGAGCAATTCAGATTTGACACCTGGGATTGAGTTCTCTGAGATCATAATGCCCGTTGGAAGGTGA 2517 0.4307 MNTCSSSLYIILFLLLQLLNLQIAFAKNTSYSPLENIALNCGTKSTEVVAYEGRNWNGDAGSKYLTFNTDTRSLIAKAPMTLESVPEIPYLTARIFKSQLTYRFKVTPGPKFIRLHFYPTSYLGLNVSNAFVSVTAGNFTLLHNFSVSLTTDYLNWAYVMKEYIVHVSGRTLELTFSPSSNASDAYAFVNGIEVVSMPSNLYIRGNNAPLPLVGHDPVLCYIYNSSALENMYRVNVGGDEIAAKYDTGMFRTWTTDVDNSFGGSLDNEPTDMNVPILYTTAVPSYTAPEGVYRTASQMASFVDGLVNLNYNLSWFFQIDSGFSYLVRLHFCDVLRDINLVNQVVFTIYLNNQTAEDQFDVVAFGGRGVPIYQDYVVMVPEASEVKQDLWLDLHANVKTKPQYYTAFLNGVEIFKLSNADGNLAGINSVMNKSKSAVRVPQVAVSKRTKKIKFIVIGCGLGAGALALPILLCLIGCRLKLTRPSRTSWCGLPILTPNHIKKVSKSLRHQFSMDEIRATTNNFDEALVIGIGGFGKVYKGSFDGGSTFVAIKRSNPMSEQGALEFEREIHMLSQLRHHNLVSLMGYCQEDGEMILAYEFMANGTLFDHLHLRQMEELHLSWTQRLEICIGVARGLHYLHTGTEHRIIHRDIKTSNILLDQNWKAKISDFGLSKESNSALVSTNVKGSVGYLDPEYFRCHKLTEKSDVYSFGVVLMEVVSARPAVSPVEDDEHGILADWALHCYENGIIAQLVDPDLEGMIDADCFEIYLGVAHKCLAEKGLERPPMGDVLQSLELALQLQKNANMAPGRDVNRTENTGSKSNSDLTPGIEFSEIIMPVGR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1377 838 Gene3D Transferase(Phosphotransferase) domain 1 598 817 - -
Glsi09g1377 838 FunFam receptor-like protein kinase FERONIA 493 597 - -
Glsi09g1377 838 Pfam Protein tyrosine and serine/threonine kinase 526 719 IPR001245 GO:0004672|GO:0006468
Glsi09g1377 838 FunFam FERONIA receptor-like kinase 36 198 - -
Glsi09g1377 838 Pfam Malectin-like domain 39 414 IPR024788 -
Glsi09g1377 838 FunFam Receptor-like protein kinase FERONIA 598 813 - -
Glsi09g1377 838 Gene3D - 36 198 - -
Glsi09g1377 838 Gene3D - 227 417 - -
Glsi09g1377 838 PANTHER OS03G0124300 PROTEIN-RELATED 10 477 IPR046957 GO:0004672
Glsi09g1377 838 CDD STKc_IRAK 527 792 - -
Glsi09g1377 838 ProSitePatterns Protein kinases ATP-binding region signature. 527 550 IPR017441 GO:0005524
Glsi09g1377 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Glsi09g1377 838 Gene3D Phosphorylase Kinase; domain 1 506 597 - -
Glsi09g1377 838 FunFam FERONIA receptor-like kinase 226 416 - -
Glsi09g1377 838 SUPERFAMILY Protein kinase-like (PK-like) 494 792 IPR011009 -
Glsi09g1377 838 ProSiteProfiles Protein kinase domain profile. 521 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1377 838 MobiDBLite consensus disorder prediction 804 825 - -
Glsi09g1377 838 SMART serkin_6 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1377 Glsi-ChrGlsi09 10151986 10154502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1377 31 801 Receptor kinase-like Gene Family AT3G51550 50.125 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi09g1377 Malectin_like 9.4e-39 CL0202