Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1376 ATGTGCTCTTTCCCCTTCTATCATGGCCTTAATTTCATTCGATTTTACTTTCTTTCAACTTCGTACTTGGGGACAAACCCCTCCAAAGCTTACTTTTCTGTCAAGACTGGTCCTTACTCTCTCCTAAGTAATTTCAGCCCGTCAATTGCTGCAAAAGAGTTTAATTTAGTCCACTTCACTAAAGATTTCTTGGTCAATGTCAAGGAAAAGAGACAAAACATAATTTTCACTCCATCTTCTCTGGTTTCCAATGCAATTGCCTCAGTAAACGGCATTGAGATCTTCTCAGTGCCCCTTAGTATTTACTTTCCAAGTCCCAAAGGTCCTCTCCCTTTTCTTGGGCAATTACCGTTCTTTATTAATGATGAATACACTCTTGAAATGCTTTACCGGGTCAATGTTGGAAATGGTGGTAATGTTGAAAATGTATTTGGGACATGGATCGACACACCGCGAGAACTACATTGGACCGCAAGGACAATGGGTAGCCAAGAGGACGATTACATGAGAGACTATGTTGTTGTGGTTCCTATGGAAAGTGGTAGAAAGCATGATATGCAGATTGACCTTCAACCCAATATGAAGTCAAGACCCAAAACAGGGACGAGAATTAAGTGGGCAACTATTTGGAAGGTCGCATCAAACTCTGCTGGCAAAAGTCGCACAAATTTGCAAATAACAATGAGCTCAGGCACTCTTCGCGATCACTTATACAAGACACAGAAGCAACCACTGCATTGGAATCAAAGACTAAAAATTTGTGTTGATGCAGCTCGAGGATTACATTACCTCCGTACAGGTAAAAGGCACCCAGTCATTCACCGTGATATCAAGTCAACCAACATATTATTGCATCAGAATTTGGTTGCCAAAATTTCAGACTCTGGGTTATCCAGAATTGGCACCACCTCCACATCCTGCAACCATGTTAGCACTGATGTTAAGGGTACTTTTGGCTATGTAGATCCTGAATACTACAGGAGAAGAAAGCTAACTGAAAAATCTGATGTATATTCATTTGGGGTGGTGTCGCTTGAAGTGTTATGTGGAAGGCCAGCAGTGAATCCTATGGCAGTAAAAGAGGATAGTGAGAAAGTTGGCTTGGTTGAGTGGGATTGGCATTGGCGCATTGCTATCGCTCTGGGACAATTGATCGAACGATTGACCCGCATTTACTTGGAGGGAATGTATCAGATTGCCTCATGGCATCTGTGGATATTGCCATTAAATGCCTCACAGATGGAAGCACAGAAAGGCCGACTATGGGGGAAGTGCTTAGTAATTTGA 1287 0.4227 MCSFPFYHGLNFIRFYFLSTSYLGTNPSKAYFSVKTGPYSLLSNFSPSIAAKEFNLVHFTKDFLVNVKEKRQNIIFTPSSLVSNAIASVNGIEIFSVPLSIYFPSPKGPLPFLGQLPFFINDEYTLEMLYRVNVGNGGNVENVFGTWIDTPRELHWTARTMGSQEDDYMRDYVVVVPMESGRKHDMQIDLQPNMKSRPKTGTRIKWATIWKVASNSAGKSRTNLQITMSSGTLRDHLYKTQKQPLHWNQRLKICVDAARGLHYLRTGKRHPVIHRDIKSTNILLHQNLVAKISDSGLSRIGTTSTSCNHVSTDVKGTFGYVDPEYYRRRKLTEKSDVYSFGVVSLEVLCGRPAVNPMAVKEDSEKVGLVEWDWHWRIAIALGQLIERLTRIYLEGMYQIASWHLWILPLNASQMEAQKGRLWGKCLVI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1376 428 ProSiteProfiles Protein kinase domain profile. 126 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1376 428 SUPERFAMILY Protein kinase-like (PK-like) 228 374 IPR011009 -
Glsi09g1376 428 PANTHER OS07G0166700 PROTEIN 228 384 IPR045272 GO:0004714|GO:0006468
Glsi09g1376 428 SMART serkin_6 126 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1376 428 Gene3D Transferase(Phosphotransferase) domain 1 228 404 - -
Glsi09g1376 428 Pfam Protein tyrosine and serine/threonine kinase 227 357 IPR001245 GO:0004672|GO:0006468
Glsi09g1376 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Glsi09g1376 428 Gene3D - 2 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1376 Glsi-ChrGlsi09 10139707 10142817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1376 228 395 Receptor kinase-like Gene Family AT3G51550 57.143 4.11e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi09g1376 PK_Tyr_Ser-Thr 3.4e-27 CL0016