Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1375 ATGAATACTTGCTCTTGTTCTCTATACTTTATTTTGTCTCTCCTTCTTCAACTCTTGCATCTGCAAATTGCTTTCGCTAAAAATGCCAGTTATTCTCCCTTAGAAAACATTGCTCTCAACTGTGGCACTAACTCATCAGAACTTGTTGCATACGAGGGAAGGAACTGGACAGGTGATGCAGGTTCACAGTATCTAACCTTTAATGCAAACACCAGGTCCCTGATAGCCAAAGTCCCAAAGACTCTTGCATCTGTTCCTGAAATTCCTTATATTACTGCTCGAATCTTTAAATCTCAATTCACATACAGGTTCAACGTGACCCCAGGTCCAAAATTCATCCGCCTTCACTTCTACCCAACTTCTTACTTGGGTCTCAGTGTCTCCACTGCTTATGTATCGGTCACTGCTGGTAACTTCACTCTCCTGCATAACTTTAGTGTTTCTCTCACTACTGATTACTTAAACTTGACATATGTGATGAAAGAGTTCATCGTCCATGTAAGTGGAAGAACTTTGGAACTTACTTTCAGCCCATCATCCAATGCTTCTGATGCCTATGCATTCGTGAATGGAATGGAAGTTGTTTCCATGCCTTCTAATCTCTATATTCGGGGCAATAATGCCCCTCTTCCATTAGTTGGTCATGATCCTGTGCAGTATTACATTTACAACAATTCTTCCATGGAAACCATGTATAGAGTCAATGTAGGAGGCGACGAAATTGCAGCCAAGTATGATACGGGAATGTTTCGCACTTGGACCAGCGATGCAGATAACTTATTAGGATCTTTTTTAGACAATGAACCCTTTGATATGAACATGTCAATTCTGTATCCAACTACTGCTCCATCATATACTGCACCAGAAGATGTCTACCGTACAGCGCGTGCAATGGGATCCTTTCTAAATGGCCTTGTCAACTTAAACTATAATCTATCGTGGTTCTTTCAGATCGATTCTGGTTTCAGTTATCTCGTTAGGTTACACTTTTGTGATGTTCTCCGAGACATAGATTTGGTGAATCAGGTAGTTTTTACGATATATTTGAATAATCAAACAGCTGAGGATGAGGCTGATGTAGTCGCCTTGAGTGGGGGCCGTGGAGTTCCTGTGTTCCAAGACTACGTTGTGATGGTTCCGGAAGCAAGCGAGGTAAAGCAGGATCTTTGGCTTGATCTTCATCCAAATGTGAAAACAAAACCCCAGTACTACACTGCTTTCTTGAATGGAGTGGAGATTTTTAAGCTGAGCAATGCTGATGGAAATCTTGCAGGGATTAACCCTGTCATGAACAAGTCTAAGTCAGCTGTGCGAGTGCCCCAAGTTGCAGTGTCTAAAAGGCCGAAGAAAATCAAATTCATTGTCATTGGATGTGGACTGGGTGCGGGGGCACTAGCACTACCTATTCTCCTATGCTTGATTGGTTGCAGGTTGAAGTTAACTAGGCCAAGTAGGACATCATGGTGTGGTCTCTCTATTCTTACTCCTAATCATATCAAAAAGGTTAGCAAGTCTTTTCGCCACCAATTTTCCATGGACGAGATTAGAGTGGCAACAAATAACTTTGATGAGGCTCTAGTCATTGGCATTGGTGGGTTTGGCAAAGTTTATAAGGGTAGTTTTGGTGGTGGGTCTACCTTCGTAGCCATAAAGCGCAGCAATCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGAGAGAGATCCATATGCTCTCCCAGTTGCACCATCACAACATTGTTTCCCTAATGGGTTATTGCCAAGAAGATGGGGAGATGATACTGGCTTATGAGTTTATGGCCAACGGGACACTATTTGACCATCTTCATTTGAGGCAGGGGGAAGAACTCCCTTTGTCATGGACTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTACACTACCTACACACTGGCACTGAACACAGGATCATCCACCGTGACATCAAGACAAGCAATATACTCCTAGACCAGAACTGGAAGGCCAAAATTTCTGACTTTGGTTTGTCAAAGGCAAGCAACTCAGCCTTGGTAAGTACCAACGTCAAGGGTAGTGTTGGATACTTGGATCCAGAGTACTTTCGATGTCTTAAGTTGACTGAGAAATCTGATGTATATTCATTTGGGGTGGTGTTATTGGAGGTGGTAAGTGCAAGGCCTGCTGTGAGTCCAGTTGAAGATGATGAGCATGGTATCTTGGCCGACTGGGCTCTGCATTGCTATGAGAATGGTATTATAGCTCAAATGGTGGACCCTGACCTGGAAGGAGTGATAGAAGCACATTCTTTGGAGATATATTTAGAGGTGGCTAAGAAATGCTTAGCTGAAAAAGGGTTGGAGCGCCCCTCCATGGGTGATGTGCTGCAGAGCCTTGAAGTGGCATTGCAGCTTCAGAAAAATCCTAATGTGGGACCAGGTAGAGATATAAACAGAACAGAAAATACTGGTTCGAAGAGCAATTCAGATTTGACACCTGGGATTGAGTTCTCTGAGATCATAATGCCCATTGGAAGATGA 2520 0.4306 MNTCSCSLYFILSLLLQLLHLQIAFAKNASYSPLENIALNCGTNSSELVAYEGRNWTGDAGSQYLTFNANTRSLIAKVPKTLASVPEIPYITARIFKSQFTYRFNVTPGPKFIRLHFYPTSYLGLSVSTAYVSVTAGNFTLLHNFSVSLTTDYLNLTYVMKEFIVHVSGRTLELTFSPSSNASDAYAFVNGMEVVSMPSNLYIRGNNAPLPLVGHDPVQYYIYNNSSMETMYRVNVGGDEIAAKYDTGMFRTWTSDADNLLGSFLDNEPFDMNMSILYPTTAPSYTAPEDVYRTARAMGSFLNGLVNLNYNLSWFFQIDSGFSYLVRLHFCDVLRDIDLVNQVVFTIYLNNQTAEDEADVVALSGGRGVPVFQDYVVMVPEASEVKQDLWLDLHPNVKTKPQYYTAFLNGVEIFKLSNADGNLAGINPVMNKSKSAVRVPQVAVSKRPKKIKFIVIGCGLGAGALALPILLCLIGCRLKLTRPSRTSWCGLSILTPNHIKKVSKSFRHQFSMDEIRVATNNFDEALVIGIGGFGKVYKGSFGGGSTFVAIKRSNPMSEQGALEFEREIHMLSQLHHHNIVSLMGYCQEDGEMILAYEFMANGTLFDHLHLRQGEELPLSWTQRLEICIGVARGLHYLHTGTEHRIIHRDIKTSNILLDQNWKAKISDFGLSKASNSALVSTNVKGSVGYLDPEYFRCLKLTEKSDVYSFGVVLLEVVSARPAVSPVEDDEHGILADWALHCYENGIIAQMVDPDLEGVIEAHSLEIYLEVAKKCLAEKGLERPSMGDVLQSLEVALQLQKNPNVGPGRDINRTENTGSKSNSDLTPGIEFSEIIMPIGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1375 839 FunFam FERONIA receptor-like kinase 36 198 - -
Glsi09g1375 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Glsi09g1375 839 MobiDBLite consensus disorder prediction 801 826 - -
Glsi09g1375 839 ProSiteProfiles Protein kinase domain profile. 522 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1375 839 Pfam Malectin-like domain 39 415 IPR024788 -
Glsi09g1375 839 CDD STKc_IRAK 528 793 - -
Glsi09g1375 839 PANTHER OS03G0124300 PROTEIN-RELATED 10 477 IPR046957 GO:0004672
Glsi09g1375 839 Gene3D Phosphorylase Kinase; domain 1 507 598 - -
Glsi09g1375 839 FunFam FERONIA receptor-like kinase 226 417 - -
Glsi09g1375 839 Gene3D - 226 417 - -
Glsi09g1375 839 Gene3D - 36 198 - -
Glsi09g1375 839 Pfam Protein tyrosine and serine/threonine kinase 527 791 IPR001245 GO:0004672|GO:0006468
Glsi09g1375 839 Gene3D Transferase(Phosphotransferase) domain 1 599 811 - -
Glsi09g1375 839 SMART serkin_6 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1375 839 ProSitePatterns Protein kinases ATP-binding region signature. 528 551 IPR017441 GO:0005524
Glsi09g1375 839 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
Glsi09g1375 839 FunFam Receptor-like protein kinase FERONIA 599 813 - -
Glsi09g1375 839 FunFam receptor-like protein kinase FERONIA 492 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1375 Glsi-ChrGlsi09 10133794 10136313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1375 29 801 Receptor kinase-like Gene Family AT3G51550 50.249 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi09g1375 Malectin_like 2.8e-36 CL0202