Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1374 ATGAAGAAAATCCAGAGAGTAAAGTTATGCAAGTATGCTCTGAACTTTGTGATGCACCTCTCCTTCTTCCATTTATTTACTTTAACAACCTGTGATTCCACTGATTTCCCTTCAGATAAAATCCTCCTCAACTGTGGCTCTCTGGGAGCATCACAATTCAACGGAGAAAAATGGATAGGTGACACTGGCTCCAAATTCTTGCCTCCAGCATATGACAAAAGATCCTCTGCACTCTTGGTCTCAAACCTTAACTCTACAGTACCTGAAATCCCATACTCAACGGCACGCGTGATTCGTTCTCCATTCACGTACTCTCTCCCCTTCTCTCATGGCCTTATTTTCATCCGCTTTTACTTTCTTTCAACTTCGTACTTGGGGATAAACCCCTCCGAATCTTACTTTTCTGTCAAGACTGGCCCGTACACTCTCCTAAGTAATTTCAGCCCAGCAATTGCAGCAGAAGAGCTTAAATTAGTCTACTTCACTAAGGATTTCTCGGTCAATGTCAAGGAAAAGAGACTAAACATAACTTTCACTCCATCTTCTCTGGTTTCCAATGCAATTGCCTCAGTAAATGGCATTGAGATCTTCTCAGTGCCCCTCAGTATTTACTTTCCAGGTCCCAACGCTCCTCTTCCTTTTCTTGGGCAGTTGGTACCGTTCTTTATTAATGATGAATACGCTCTTGAAATGCTTTACCGGGTCAATGTTGGAAATGGTGCTACTGTTGAAAATGTATTTGGGACATGGGTCGACGATTTAAGCTACATGCCTGGTTTTAGATATGGAAGTCTCCTTAGTATTCAAGCTCGTCCTACTGACGTGATTTACAAATCTTCCAAATCCAATGATTATGATTATGCAGCACCGCGAGAACTATATTGGACCGCAAGGACAATGGGTAGCCAAGAGGACGATAACATGAGGTACAATTTGACATGGTCGTTCCCTGTTGATTCAGGTTTCAAATACCTTATAAGGCTTCATTTCTGCGAGATATCCCTGGAGGTAACACAGGTCAACCAAAGGGTGTTCGAGGTATATATCAACAACCAAACAGCGGAGGAGAGCATGGACTTGGTTGCCTTGGCTGGTGCACCATTTGTTACTTTATACAGAGACTATGTTGCAATGGTTCCTATGGCAAGTGAGAGAAAGTATGATATGCAGATTGCCCTTCACCCCAATATGAAGTCAAGACCGAAGTATGCTGATGCCATACTGAATGGCATTGAGATCATCAAGTTAAGTGATGGCAGAAACAATCTTGCGGCTAGAATTCAACTGAAAATGGAACAGAAGGAAAAGAAAATACCATATGGCATTATTTTTGGAAGTACTTTAGGAGCCATCTTTGGGCTGCTCATTACATTTTTCATTCTTAACAGCAAAACAGGGACGAGAATTAAGTGGGCAACTTTTTGGAAGGTCCCATCAAACTCTGCAGGCGAAAATCGCACAAATTTCCAAATAACAATGAGCTCAGGTCAATGCTACCAATTCACGTTAGCTGAGATCAGAGCAGCCACCAAAAACTTCAGCGAAGCTCTTGTCATTGGAGAGGGAGGCTTTGGCAAGGTGTACAAAGGTTTCATCAATGATGGAGTCACTTCTGTGGCAGTAAAGCGCTGTAATCCTACGTCCCGCCAAGGATTTAGGGAGTTTCAAAATGAAATAAATTTGTTGTCCTCATTTTGTCACATGAATTTAGTCTCACTTCTGGGCTACTGCCGAGAGGACAATGAGCTGATACTTGTCTACGAATACATGGCTGAAGGCACTCTTCGCGATCACTTATACAAGACAGAGAGGCAGCCACTGCATTGGAATCAAAGACTAAAAATTTGTATTGATGCAGCTCGAGGATTACATTACCTCCATACAGGCAAAAGGCACCCAGTCATTCACCGTGATGTCAAGTCAGCCAACATATTATTGGATCACAATTTGGTTGCCAAAATTGCAGATTTTGGGTTATCTAGAATTGGCCCCACCTCCACATCCTGCAACCATGTTAGCACTGATGTTAAGGGTACTTTTGGCTATGTAGATCCTGAATACTACAGGAGAAGAAAGCTAACTGAAAAATCTGATGTATATTCATTTGGGGTGGTGTTGTTTGAAGTGTTATGTGGAAGGCCAGCAGTGAATCCTATGGCAGTGGAAGAGGATGGTGAGAAAGTTGGCTTGGTTGAGTGGGCTTGGCATTGCTATCACTCTGGGACAATTGATCGAATGGTTGACCCGCATTTACTAGGAGGAACTGCATCAGATTGCCTCATGACATTTGTGGATATTGGCATTAAATGCCTCACGGATAGGAGCACAGAAAGGCCAACTATGGGGGAAGTGCTTAGTAATTTGGAGAAGCTTTTGATGTTGCAGGAGAACCTAGATGAACAAGAAACGAATAGAGATCCACATTTACTTATTGGAGTAAATGAAATCACCATAGCCAATAGGTTAATTTATGAACATGTTCATGAAATTATAGTGCCAATGGATTGA 2508 0.4226 MKKIQRVKLCKYALNFVMHLSFFHLFTLTTCDSTDFPSDKILLNCGSLGASQFNGEKWIGDTGSKFLPPAYDKRSSALLVSNLNSTVPEIPYSTARVIRSPFTYSLPFSHGLIFIRFYFLSTSYLGINPSESYFSVKTGPYTLLSNFSPAIAAEELKLVYFTKDFSVNVKEKRLNITFTPSSLVSNAIASVNGIEIFSVPLSIYFPGPNAPLPFLGQLVPFFINDEYALEMLYRVNVGNGATVENVFGTWVDDLSYMPGFRYGSLLSIQARPTDVIYKSSKSNDYDYAAPRELYWTARTMGSQEDDNMRYNLTWSFPVDSGFKYLIRLHFCEISLEVTQVNQRVFEVYINNQTAEESMDLVALAGAPFVTLYRDYVAMVPMASERKYDMQIALHPNMKSRPKYADAILNGIEIIKLSDGRNNLAARIQLKMEQKEKKIPYGIIFGSTLGAIFGLLITFFILNSKTGTRIKWATFWKVPSNSAGENRTNFQITMSSGQCYQFTLAEIRAATKNFSEALVIGEGGFGKVYKGFINDGVTSVAVKRCNPTSRQGFREFQNEINLLSSFCHMNLVSLLGYCREDNELILVYEYMAEGTLRDHLYKTERQPLHWNQRLKICIDAARGLHYLHTGKRHPVIHRDVKSANILLDHNLVAKIADFGLSRIGPTSTSCNHVSTDVKGTFGYVDPEYYRRRKLTEKSDVYSFGVVLFEVLCGRPAVNPMAVEEDGEKVGLVEWAWHCYHSGTIDRMVDPHLLGGTASDCLMTFVDIGIKCLTDRSTERPTMGEVLSNLEKLLMLQENLDEQETNRDPHLLIGVNEITIANRLIYEHVHEIIVPMD 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1374 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Glsi09g1374 835 FunFam receptor-like protein kinase FERONIA 477 589 - -
Glsi09g1374 835 CDD STKc_IRAK 519 791 - -
Glsi09g1374 835 Gene3D Transferase(Phosphotransferase) domain 1 590 813 - -
Glsi09g1374 835 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Glsi09g1374 835 Gene3D Phosphorylase Kinase; domain 1 476 589 - -
Glsi09g1374 835 SMART serkin_6 513 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1374 835 FunFam Receptor-like protein kinase FERONIA 590 808 - -
Glsi09g1374 835 SUPERFAMILY Protein kinase-like (PK-like) 488 789 IPR011009 -
Glsi09g1374 835 Gene3D - 227 417 - -
Glsi09g1374 835 Gene3D - 41 199 - -
Glsi09g1374 835 Pfam Malectin-like domain 44 415 IPR024788 -
Glsi09g1374 835 FunFam FERONIA receptor-like kinase 40 200 - -
Glsi09g1374 835 FunFam FERONIA receptor-like kinase 227 417 - -
Glsi09g1374 835 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Glsi09g1374 835 ProSiteProfiles Protein kinase domain profile. 513 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1374 835 PANTHER OS07G0166700 PROTEIN 497 795 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1374 Glsi-ChrGlsi09 10129616 10132123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1374 37 801 Receptor kinase-like Gene Family AT3G51550 45.636 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi09g1374 Malectin_like 1.3e-28 CL0202