Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1367 ATGGAATCTTGGAGTTACGCCTCAGAAGAGAAAGGCTATATGTTTTCTGACGAAATGGATTTTTCACTTGATGCTTTTATGAGAAGTAGAAGAGCATTAGTTGAATGGGACAGCAAAGCCTCCTGTAACTTCGAGAAAGATGGGTTTCTTTCAGATAAAGAGGTAATTAAAAGCATGGAGTTTGTCGACTTGGGGTTTCCTGATTTGTTCAGAAGGCCCATTCATGGTAGCCAGCCACCGGAGACATCCAGCTGCGAGCAAGATAGTAATTCTAGTAAAATAGTGAACTCTTCTACTCCTGTTATTGCTTTAAATTCACCTTTGGGGGAAGTAGAATCTGAGTCAAAGCATTCAAATTCTCTAGTTGAATCAAGAAGTCACGATTCATCACTGATTGATTTGAAGCTAGGGAGATTAGCAGATTGCAAAAATGCAAACAGTGATCAAAATGCCAAAGAGGGGTTCACTTTTTCATCTACATATCCAGCTACGCTTGCAAAGAGAGCTCGCAGTTCCAGCTCACCTACTCAGACACCTGTATGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCACAAAGTTTGTGATGTTCACTCCAAGACAGCTAAAGTTATTGTTAATGGGATTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGTTGTCGCAGACGCCTAGCAGGACATAATGAACGTCGAAGGAAGCCTCAGTTTGATTACATCTCTGGTAAACCTCAGATGCTTCAGTCATATCAAGGTACCAAATATCTAGGGGCTTCATTACAGAAGAGACCGCAGTTTGCCTTTCAAGATATGTTTCAAAGTGCCCTTTTTAACACAGGAAAGTATGAACAAACCAATCAGAGTGGACATATCAAATTTGAAGATGAATCAATTTACAGTCCTCAACTACCAGGACCTGTAACACATGGTCAAGAGTTATCTAGGGCCTCAAACTCCAGCTGTGCTCTCTCTCTTCTGTCAGCTCAGCCACAGGATCTACCACGATACTCAGCTGGAAATCTAATTGCTAGCAGTTCCCTTATTTCTCAAGGCACCAGCAAAAACCGAAGTGATGGCCAAGTTTCTGAAATACCTTTTGGGATGAGCTCTGTGGATAAATATGCCCCAAATGAGTCCTTTTCATGTGGGATAAACTCTATGGAAGTTACTAAGAACGGATCCACAATGCTCTCTGATGCTGGCCATGCTCTTCAACTCAAAGTCCATGGAGATGATATTTGCAAACCATCAGATTCGTCAAATGTCAAATATCGTCTACCCCATGAACATGGAACCACTGTTGATCTATTCCAATTATCGACACATCTTCAAAGGGTGGAACAGCAAAGAAATTCTTTTCCAGTAAAGCGTGAAAGTGAAGACTGCTGCTTTTTTCCAACCCTATCATGGACTGCAGGAAAATTCCACAGTTCTACAGTGTTCTCATGCAACTGGTTAATGGTTAGGTTCGGGGGTATATTCAAAGGGACAAAGAAGCAAAATGGAATCGGGCCACCTGAAAAAGACGACATAATTAAGGTTGGCTCTGCTTTTCAACTTTTCAGTTGTTTATTCAGGTGGGTTGGCTCTTCGGTGGTCCAAGGGAAGAGATAA 1674 0.4188 MESWSYASEEKGYMFSDEMDFSLDAFMRSRRALVEWDSKASCNFEKDGFLSDKEVIKSMEFVDLGFPDLFRRPIHGSQPPETSSCEQDSNSSKIVNSSTPVIALNSPLGEVESESKHSNSLVESRSHDSSLIDLKLGRLADCKNANSDQNAKEGFTFSSTYPATLAKRARSSSSPTQTPVCQVYGCNMDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPQMLQSYQGTKYLGASLQKRPQFAFQDMFQSALFNTGKYEQTNQSGHIKFEDESIYSPQLPGPVTHGQELSRASNSSCALSLLSAQPQDLPRYSAGNLIASSSLISQGTSKNRSDGQVSEIPFGMSSVDKYAPNESFSCGINSMEVTKNGSTMLSDAGHALQLKVHGDDICKPSDSSNVKYRLPHEHGTTVDLFQLSTHLQRVEQQRNSFPVKRESEDCCFFPTLSWTAGKFHSSTVFSCNWLMVRFGGIFKGTKKQNGIGPPEKDDIIKVGSAFQLFSCLFRWVGSSVVQGKR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1367 557 MobiDBLite consensus disorder prediction 77 93 - -
Glsi09g1367 557 Pfam SBP domain 181 254 IPR004333 GO:0003677
Glsi09g1367 557 SUPERFAMILY SBT domain 179 260 IPR036893 GO:0003677|GO:0005634
Glsi09g1367 557 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 118 472 IPR044817 GO:0003677
Glsi09g1367 557 MobiDBLite consensus disorder prediction 72 93 - -
Glsi09g1367 557 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
Glsi09g1367 557 Gene3D - 171 242 IPR036893 GO:0003677|GO:0005634
Glsi09g1367 557 FunFam Squamosa promoter-binding-like protein 14 172 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1367 Glsi-ChrGlsi09 10059329 10064874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1367 132 486 SBP-box Gene Family AT1G69170 38.889 5.63e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Glsi09g1367 SBP 1.6e-31 No_clan