Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1344 ATGCTTGCTCTTTCCCTGCTCGGTTCTCTTAAATTGCCAACGAGACGCGGGACAATGAGGCGTTTCAGGGTTGTGGTGGCTGATGGTTTCCCTTCGTTTCTTCCAAAACAAATTGAGAAAATCAAAGACCCTTTTGCTCGAAACCTCGCTATGAGGATTCAGAGGCTTCCCGTACCTGTTAAGTTCTCAGAAGATCCCCTAATGAGTAGTTGCGTGAAGCCATTGATACAGAACAAGGCAAATCCAGTAGTTCTTCTGCATGGTTTTGACAGCTCATGTTTAGAATGGAGAAATGCATATCCATTGGTTGAGGAAGCTGGTTTTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCATCATGTAATGTGGTATCCAAGCGTGACCACTTCTATCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGACATTAGTTGGAGCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTACAGTCAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCCAGTGTATATGCAGAGGGAATAGGAATCCTGGCAACCTTACCTAGAGTGGCAACTCATGCTGGGGTATGTTTATTGAAGAGCATCCCCTTACGCTTATGTGCAAACTATTTGACCTTCACTAACATATCATTTAGCACCAACCTGGACTGGACTAATGTGGATCGCTTGCATTGTTTATTGCCTTGGTGGGAAGATGCTATGGTGGATTTTATGACTAGTGGTGGTTATAATGTTGCTCCACAGATAAAAAAGGTAAAGCAGAAAACACTCATCATTTGGGGTGAGAATGACCGCATCATCAGCAATAAGCTTGCAGTGCGACTGCACTGTGAATTACCTGATGCAATTATACGGCAAATACCCAATTGTGGCCACCTTCCTCATCTTGAAAAGCCAGAATCTGTGGCCAAATTAATCGTTGACTTTGTTCAGAAAGAAACCAACAAGGTAAATCAACGTGTTTCAGCTTTATGA 1017 0.4307 MLALSLLGSLKLPTRRGTMRRFRVVVADGFPSFLPKQIEKIKDPFARNLAMRIQRLPVPVKFSEDPLMSSCVKPLIQNKANPVVLLHGFDSSCLEWRNAYPLVEEAGFETWAIDILGWGFSDLEKLPSCNVVSKRDHFYQFWKSYIRRPMTLVGASLGSAVAIDFTVNYPEAVEKLVLIDASVYAEGIGILATLPRVATHAGVCLLKSIPLRLCANYLTFTNISFSTNLDWTNVDRLHCLLPWWEDAMVDFMTSGGYNVAPQIKKVKQKTLIIWGENDRIISNKLAVRLHCELPDAIIRQIPNCGHLPHLEKPESVAKLIVDFVQKETNKVNQRVSAL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1344 338 PRINTS Alpha/beta hydrolase fold signature 107 122 IPR000073 -
Glsi09g1344 338 PRINTS Alpha/beta hydrolase fold signature 270 284 IPR000073 -
Glsi09g1344 338 PRINTS Alpha/beta hydrolase fold signature 166 179 IPR000073 -
Glsi09g1344 338 PRINTS Alpha/beta hydrolase fold signature 152 165 IPR000073 -
Glsi09g1344 338 PANTHER HYDROLASE 28 327 - -
Glsi09g1344 338 Gene3D alpha/beta hydrolase 74 335 IPR029058 -
Glsi09g1344 338 SUPERFAMILY alpha/beta-Hydrolases 80 325 IPR029058 -
Glsi09g1344 338 PRINTS Epoxide hydrolase signature 166 179 IPR000639 GO:0003824
Glsi09g1344 338 PRINTS Epoxide hydrolase signature 107 122 IPR000639 GO:0003824
Glsi09g1344 338 PRINTS Epoxide hydrolase signature 87 105 IPR000639 GO:0003824
Glsi09g1344 338 PRINTS Epoxide hydrolase signature 301 323 IPR000639 GO:0003824
Glsi09g1344 338 Pfam Serine aminopeptidase, S33 82 312 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1344 Glsi-ChrGlsi09 9906383 9915027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1344 244 334 Acyl Lipid Metabolism Gene Families AT3G10840 28.000 2.37e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1344 09 9906383 9915027 Glsi09g1344 09 9906383 9915027 ECH