Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1341 ATGGCTTCCGCTAGTAACTCATTTTACATATCAGTTCAGAGACCTCGAATTTCATCGCTTTATTGGTTACCCAGAAGAATTTCGACCGATTCTGGTTTTCTAAAAGCTCGGGCACTTGAGCCTAGGGACTCAAGCTTGGCGTTCTCGCCATTGTTACAGAATGGGAAGCACCTGGTGCCACTGCCGGTTGTGCAATCTGGGAAAGCTCCGGGTTTGGGCATGCTTGGTTGGGGTCAGCAACTGAGGCGGCGAAGCTCGGTTGAATTTCCTGTTGTTGCAGCGGCAGCCGCAGATGCTGGTGATGGTGAAATCGAAATCTCAGATGGGTCTGTTAGGCCCTCAAAGAGTTTCGGTGAGAAATTTCCTGCATTGGTCACTGGTTTCTTTTTCTTTATGTGGTATTTCTTAAATGTGATCTTCAACATACTCAACAAGAAAGTGTATAATTATTTCCCGTATCCCTACTTTGTTTCTGTTGTACATCTCCTTGTGGGTGTGGTATATTGCCTTGTTTGCTGGGCTGTAGGTCTACCAAAACGTGCTCCAATTGATAAGGAGCTCTTGGCACTTTTGACTCCAGTTGCATTTTGTCACGCCCTTGGTCATGTCATGTCCAATGTATCATTTGCTGCTGTTGCTGTGTCTTTTACGCACACCATAAAAGCTCTGGAGCCATTTTTCAATGCTGCAGCTTCCCAGTTTGTGTTGGGCCATCAGATTCCATTGTCTTTGTGGCTATCATTGGCCCCTGTTGTTATTGGTGTATCAATGGCATCGCTAACTGAACTTTCTTTCAATTGGACTGGTTTCATTAGTGCGATGATTTCAAATATAGCATTCACTTACAGAAGTTTATATTCAAAGAAAGCAATGACTGGAATGGACAGTACGAATGTGTATGCCTATATTTCAATAATTGCCCTCTTCTTTTGCCTCCCCCCAGCAATACTTATTGAGGGTCCTCAACTTATGGAATTTGGTTTTAGAAATGCTATTGCCAAAGTAGGCCTGATCAAGTTTCTGTCTGATCTGTTCTGGATTGGAATGTTTTACCATCTGTACAATCAGTTGGCTACTAACACCTTGGAAAGGGTTGCACCATTGACACATGCGGTTGGAAATGTGTTGAAGCGAGTTTTTGTCATCGGGTTCTCAATAGTGGTTTTTGGTAATTACTCTGGCAACAAGATATCCACACAAACTGGCATTGGCACTGCTATAGCAATAGCAGGAGTTGCCATCTATTCTCTGATAAAGGCAAACTTGGAAGAGCAAAAACGAGTAAGATATTATGGACTTGTATCTTGCGATTTTGTTCATGCCATTTCTCTTTTACACCTGGATTCAATGGTAAATTTGTCTATCATAAGCTAA 1374 0.4265 MASASNSFYISVQRPRISSLYWLPRRISTDSGFLKARALEPRDSSLAFSPLLQNGKHLVPLPVVQSGKAPGLGMLGWGQQLRRRSSVEFPVVAAAAADAGDGEIEISDGSVRPSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLVCWAVGLPKRAPIDKELLALLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISIIALFFCLPPAILIEGPQLMEFGFRNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYSGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRVRYYGLVSCDFVHAISLLHLDSMVNLSIIS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1341 457 PANTHER SOLUTE CARRIER FAMILY 35 127 423 - -
Glsi09g1341 457 SUPERFAMILY Multidrug resistance efflux transporter EmrE 167 261 - -
Glsi09g1341 457 Pfam Triose-phosphate Transporter family 125 416 IPR004853 -
Glsi09g1341 457 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 124 426 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1341 Glsi-ChrGlsi09 9879630 9883661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1341 92 428 Antiporters AT5G46110 78.635 0.0 542