Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1306 ATGGGTGGAAACGGGCACCAACCGTCGTCGGCAACGCCGTCCAAGGCAGCGCCTGGGCGACCCCCACGACCCACCATCACTCTCCCGCCCCGCACTTCCATGGACACCCTTTTCAATGGTGGGCCCCCTGGCGGCGCCTTTGGCTTCAGCCCTGGTCCCATGACCCTGGTTTCCAGTTTTTTCAACGAAAACGACGACTTCAAGTCCTTCTCGCAGCTACTCGCCGGCTCTGTGGCATCCCCGCAGGCGGAGCAGAAGGACTCCGGTGAACGTGGCGAATTGGCTAATGTGCAGTCGCCGATGTTCACGGTTCCGCCGGGGTTGAGCCTTGCTGGCTTGCTCGATTCGCCTGGATTCTTTTCACCTACTCAGGGACAATTTGGCATGACACACCAGCAGGCACTAGCGCAGGTCACAGCTCAGGCTGTGCATTCCAACTCGAATATGCATATCCAAGATGAAAATCCACCTTCTTCTGTATCAGCAGCGCCTGCTGCCTCGTTGCCACAGGTTACTGCAACTAATTCCAATTTCAGACAACAGCAGCCAATGCTACAACACTCAAATCAAGACTCTGCTGCGACAATGAAGGAATGCCCTGATGATGGCTTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGCAGTGAATTCCCCAGAAGTTACTATAAGTGTACGCATCCAAATTGCCCTGTCAAGAAAAAGGTTGAGCGCTCTCTTGATGACCATGTTGTTGCAATCATTTACAAAGGACAGCACAATCATCAAGCTTCTCGCCCCAACAAGCAAGCAAAGGATGCAGCAGCAGCTTCAAATGAAAATTTGAATATGCAAGGGAATCTTGATTCAACTTCTCATCATCAGAGTGTAAGTTTGAACAGAATGAAAGAAAGGGTAATTTCTGAGTCAAAATCCAATATGGACCCAGAATCTAGTCATGCAACAGGTGAACATGTATCGGGACCAAGTGACAGTGAGGAAGCAGGTGATCATGAAACTGAAGTGGATGAGAAAAATGATGAGCCTGACCCCAAGAGGAGGCAAGGATTTACCTCTTCACATAGGACTGCCATGGAGCCTAGAATCATTGTGCAGACAACAAGTGAAGTTGATCTCTTAGATGATGGATATAGATGGCGTAAATATGGGCAGAAAGTCGTCAAAGGCAACCCTTACCCAAGGAGCTACTACAAGTGCACAACCACAGGTTGCAATGTCCGGAAGCATGTTGAGAGGGCTTCGACTGATCCTAAAGCTGTCATAACAACATATGAAGGGAAACACAATCATGATGTGCCAGCAGCTAAAACTAACAGCCACACTATTGCCAACAACAGTTCATCACAGCTAAAATCACATAATGCCATGATACCGGACAAGCATAGTTTCAGCAGCAGAGGTTTTGGGGGCAATGAGCAACAACCTGTAGCACGTCTAAGGCTGAAGGAAGAGCGGATAACCTAG 1467 0.4922 MGGNGHQPSSATPSKAAPGRPPRPTITLPPRTSMDTLFNGGPPGGAFGFSPGPMTLVSSFFNENDDFKSFSQLLAGSVASPQAEQKDSGERGELANVQSPMFTVPPGLSLAGLLDSPGFFSPTQGQFGMTHQQALAQVTAQAVHSNSNMHIQDENPPSSVSAAPAASLPQVTATNSNFRQQQPMLQHSNQDSAATMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLDDHVVAIIYKGQHNHQASRPNKQAKDAAAASNENLNMQGNLDSTSHHQSVSLNRMKERVISESKSNMDPESSHATGEHVSGPSDSEEAGDHETEVDEKNDEPDPKRRQGFTSSHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTTGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNSSSQLKSHNAMIPDKHSFSSRGFGGNEQQPVARLRLKEERIT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1306 488 MobiDBLite consensus disorder prediction 339 353 - -
Glsi09g1306 488 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 114 455 IPR044810 GO:0003700
Glsi09g1306 488 FunFam WRKY transcription factor 185 260 - -
Glsi09g1306 488 SUPERFAMILY WRKY DNA-binding domain 199 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 ProSiteProfiles WRKY domain profile. 195 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 FunFam WRKY transcription factor 33 361 427 - -
Glsi09g1306 488 Gene3D WRKY domain 359 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 Gene3D WRKY domain 187 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 MobiDBLite consensus disorder prediction 1 46 - -
Glsi09g1306 488 SMART WRKY_cls 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 SMART WRKY_cls 374 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 ProSiteProfiles WRKY domain profile. 369 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 Pfam WRKY DNA -binding domain 201 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 Pfam WRKY DNA -binding domain 375 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1306 488 MobiDBLite consensus disorder prediction 252 271 - -
Glsi09g1306 488 MobiDBLite consensus disorder prediction 306 320 - -
Glsi09g1306 488 MobiDBLite consensus disorder prediction 145 165 - -
Glsi09g1306 488 MobiDBLite consensus disorder prediction 302 360 - -
Glsi09g1306 488 SUPERFAMILY WRKY DNA-binding domain 366 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1306 Glsi-ChrGlsi09 9591601 9595374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1306 23 488 WRKY Transcription Factor Family AT2G03340 51.679 3.96e-152 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi09g1306 WRKY 1.8e-25 CL0274