Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1299 ATGAGCTCCCACTCGTCCACCGGCGGCGATTCTTCCGGCAGCGGTACGAGGGCGCCAGACAAGCGCAGGCAGAAGGAGAAGGCCATAGTGAGCCGCACTTCGATGATACTCTGGCATTCCCACCAAAACGACCCCGCCGGAGTTCGCAAGCTTCTGGAGGAGGATCCGTTATTGGTGAAGGCCAGAGACTATGATAGTCGCACTCCGCTTCATGTGGCTTCCCTCCATGGCTGGGTTGATGTTGCTAAGTGCTTGATTGAGTTTGGCGCCGAAATCAATGCCCAGGATCGTTGGAAAAACACTCCTCTGGCTGACGCAGAAGGGGCTAAAAGGTATACCATGATGGAGCTTTTAAAATCTTATGGAGGCTTATCTTATGGCCAAAGTGGAAGCCACTTTGAACCAAAGGCCGTTCCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTCGACCCTTCAGAGCTGGACTTCTCACATTCTGCTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACACCAGTTGCTGTCAAACGAATTCTGCCATCTCTTTCAGACGATAAATTGGTGATCCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAAGCTTCGACACCCAAATGTAGTTCAGTTTCTTGGAGCTGTTACTGAGAGGAAACCTCTTATGTTAATTACTGAATATCTAAGAGGGGGTGATCTTCATCAGCATCTTAAGGAAAAAGGCTCGCTTAGTCCTTCAACAGCTATCAATTTTGCCATGGATATTGCCAGAGGAATGGCTTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTGAAGCCAAGGAATGTTCTTTCGGTCAACTCTAGTGCAGAACATTTAAAAGTCGGAGATTTTGGACTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTTTACAAGATGACTGGTGAAACTGGAAGCTACCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATACGATAAGAAGGTTGATGTGTTCTCCTTTGCAATGATTCTGTTCGAGATGCTCGAAGGGGAACCACCTTTTGCAAATTATGAACCTTATGATGGAGCCAAATACGTGGCAGAAGGACACAGGCCAAATATTCGTGCAAAGAGTTACACCCCCGAACTGCGAGAGTTAACAGAGCAGTGTTGGGCTGCTGATATTAGTCAAAGACCTTCCTTCTTGGAGATCCTCAAACGGCTTGAAAAGATCAAGGAAAATATACCTTCAGATAATCACTGGTACATGTTCTCTTGA 1299 0.4619 MSSHSSTGGDSSGSGTRAPDKRRQKEKAIVSRTSMILWHSHQNDPAGVRKLLEEDPLLVKARDYDSRTPLHVASLHGWVDVAKCLIEFGAEINAQDRWKNTPLADAEGAKRYTMMELLKSYGGLSYGQSGSHFEPKAVPPPLPNKCDWEVDPSELDFSHSARIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVIQDFRHEVNLLVKLRHPNVVQFLGAVTERKPLMLITEYLRGGDLHQHLKEKGSLSPSTAINFAMDIARGMAYLHNEPNVIIHRDLKPRNVLSVNSSAEHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILFEMLEGEPPFANYEPYDGAKYVAEGHRPNIRAKSYTPELRELTEQCWAADISQRPSFLEILKRLEKIKENIPSDNHWYMFS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1299 432 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Glsi09g1299 432 SMART ANK_2a 65 94 IPR002110 GO:0005515
Glsi09g1299 432 Pfam Protein tyrosine and serine/threonine kinase 160 415 IPR001245 GO:0004672|GO:0006468
Glsi09g1299 432 FunFam Integrin-linked protein kinase family 236 431 - -
Glsi09g1299 432 Gene3D Phosphorylase Kinase; domain 1 141 236 - -
Glsi09g1299 432 FunFam serine/threonine-protein kinase STY46-like 150 236 - -
Glsi09g1299 432 SUPERFAMILY Protein kinase-like (PK-like) 156 428 IPR011009 -
Glsi09g1299 432 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Glsi09g1299 432 MobiDBLite consensus disorder prediction 1 26 - -
Glsi09g1299 432 SMART serkin_6 157 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1299 432 SUPERFAMILY Ankyrin repeat 36 122 IPR036770 -
Glsi09g1299 432 Gene3D - 6 129 IPR036770 -
Glsi09g1299 432 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 82 418 - -
Glsi09g1299 432 CDD STKc_MAP3K-like 163 415 - -
Glsi09g1299 432 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Glsi09g1299 432 Gene3D Transferase(Phosphotransferase) domain 1 237 428 - -
Glsi09g1299 432 Pfam Ankyrin repeats (many copies) 51 103 IPR002110 GO:0005515
Glsi09g1299 432 ProSiteProfiles Protein kinase domain profile. 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1299 432 PIRSF ILK 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1299 Glsi-ChrGlsi09 9520394 9527841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1299 1 432 MAP Kinase Kinase Kinase AT1G14000 79.405 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Glsi09g1299 PK_Tyr_Ser-Thr 3.8e-63 CL0016