Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1289 ATGCACAGATGGTCAGCCATAGCAGCTCACTTGCCCAAGAGAACGGACAACGAGATCAAGAACTACTGGAACACCCACCTCAAGAAGAGGCTTTCCAGAATGGGCATAGACCCCATTACTCACAAGCCCAAAACCGATGCCCTAGGCGGCGGCTCCGGCCACTCGAAGGATGTCGCGAATCTCAGCCACATGGCTCAATGGGAGAGTGCTCGGCTCGAAGCTGAAGCCAGATTAGCCAGGGAGTCCAAGTTGCAGCTGATCCATAACCAAAACCAGCTCGGGGTCCACTCCTCTTCTACCTCCTCCTCTTCTCAGCCCGTGGCTCGGCTCGTCCTCAACAAAATACCCCCTCAGCCATCCCTTCCGCCATGCCTTGACGTACTCAAAGCATGGCAAAACTCATGGTCTTCATCGTCGTCGAAGGCATCAACTCCGACTAAAATGCATAATATGTACGCCATGATGCTCGCTACCGACGACCTCGAGTCGCCGACGTCGACCTTGAGCTTTCCGGAGAGCACCTTAACACTTACTAGCTCAAACAGTACCTTTGGGCTGATCAATGAAACCCCACTTCCTTCCACCACCACCAAGCCTACAGCAGCCGCCGTTGAGTTCACCAAAACTTCAACCTCATGTGACAAAGAGCCATGGGAATGGAATAGAGAGCTCGGGGAAAAGGGAATGGTGGAGAAGACTATGAGAAGCTTGCGAGACGATGATATTATGGTTGCCGTGGAAGCATTTAGAGCAGCGACGTATGAAAATAGCCCAGTGCTTCTTAATAATGATGTGATGGTGTACGAATCCAATGAGAACTCAGCACAAGGAAACTTGGGAATCATCAACGGCGATATTGGAAGTGGAAGCAGCATCTGTAACGTGAACTTTGAGGAGGATAATAAGCATTATTGGAATAGCATACTGAACTTGGTGAATGATTTGCCATCTCCACGTTCGCCTGTGTTCTGA 972 0.5041 MHRWSAIAAHLPKRTDNEIKNYWNTHLKKRLSRMGIDPITHKPKTDALGGGSGHSKDVANLSHMAQWESARLEAEARLARESKLQLIHNQNQLGVHSSSTSSSSQPVARLVLNKIPPQPSLPPCLDVLKAWQNSWSSSSSKASTPTKMHNMYAMMLATDDLESPTSTLSFPESTLTLTSSNSTFGLINETPLPSTTTKPTAAAVEFTKTSTSCDKEPWEWNRELGEKGMVEKTMRSLRDDDIMVAVEAFRAATYENSPVLLNNDVMVYESNENSAQGNLGIINGDIGSGSSICNVNFEEDNKHYWNSILNLVNDLPSPRSPVF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1289 323 Pfam Myb-like DNA-binding domain 3 27 IPR001005 -
Glsi09g1289 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 141 - -
Glsi09g1289 323 SUPERFAMILY Homeodomain-like 2 35 IPR009057 -
Glsi09g1289 323 CDD SANT 1 27 IPR001005 -
Glsi09g1289 323 MobiDBLite consensus disorder prediction 37 57 - -
Glsi09g1289 323 ProSiteProfiles Myb-like domain profile. 1 27 IPR001005 -
Glsi09g1289 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 31 IPR017930 -
Glsi09g1289 323 Gene3D - 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1289 Glsi-ChrGlsi09 9464256 9465227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1289 3 91 MYB Transcription Factor Family AT3G01140 77.778 2.91e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi09g1289 Myb_DNA-binding 1.8e-06 CL0123