Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1287 ATGGGTAGATCTCCATGCTGCCAAAACATGAGGTTGAAGAAAGGGCCATGGACACCAGAGGAAGACGAAAAGCTCACGGCTTACGTTCAGGAACATGGCCATGGAAACTGGCGTTGGTTGCCTGCCAAAGCTGCTCATTTGCCCAAGAGAACAGATAACGAGATCAAGAACTATTGGAACACCCACCTCAAGAAAAGGCTTATCAAAATGGGGATAGACCCCATTACCCACAAGCCAAAAACTGAAGCCTTGGGTGAGTCCCGGGACGCAGCCTATCTAAGACACATGGCTCAGTGGGAGAGTGCTCGACTGGAAGCAGAAGCAAGGCTCGGCTCCTCCTCCTCCTCCTCCCGCCTGCCAGATCGGCTAATGGTAAGCAAAGTCCCACCTCAACCTTCATTACCACCATGCCTAGACATACTCAAAGCATGGCAAAGTTTATGGGGACTACCAAGTGAAGATGACAATAACAGATCGTTGTATTACATGTATGCCATCATGCTCGCCAATGATGATGGCCTTCTTGAATCTCCGGCATCCGTCTCCAACGCCAAGCTTCCTACTAATACCATAGAAACTAGCAGTAGTGGTGGTCCCAAACAAAACCCAAATGTAGAACTCAGAGAAAAGAGAGTGGAAGAGGACCGCTACGACGATATTATGGTGGCTGTGGAAGCATTTAGAGCAGCAAGACATCAGAATATTATGGAAGGTCCCAATGATGATATGTCAGCTTTTGATTCCTACGAGAAACTAGCAGAGGAAATTGAAGATGAAAACGATATGAAATATTACTGGAACAGCTTAGTGAACTGGGATATATAG 825 0.4691 MGRSPCCQNMRLKKGPWTPEEDEKLTAYVQEHGHGNWRWLPAKAAHLPKRTDNEIKNYWNTHLKKRLIKMGIDPITHKPKTEALGESRDAAYLRHMAQWESARLEAEARLGSSSSSSRLPDRLMVSKVPPQPSLPPCLDILKAWQSLWGLPSEDDNNRSLYYMYAIMLANDDGLLESPASVSNAKLPTNTIETSSSGGPKQNPNVELREKRVEEDRYDDIMVAVEAFRAARHQNIMEGPNDDMSAFDSYEKLAEEIEDENDMKYYWNSLVNWDI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1287 274 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Glsi09g1287 274 SUPERFAMILY Homeodomain-like 8 73 IPR009057 -
Glsi09g1287 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 67 IPR017930 -
Glsi09g1287 274 SMART sant 13 65 IPR001005 -
Glsi09g1287 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 44 183 - -
Glsi09g1287 274 CDD SANT 16 63 IPR001005 -
Glsi09g1287 274 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Glsi09g1287 274 Gene3D - 11 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1287 Glsi-ChrGlsi09 9432169 9433389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1287 1 114 MYB Transcription Factor Family AT5G15310 53.293 4.89e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi09g1287 Myb_DNA-binding 2.5e-13 CL0123