Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1285 ATGCCAATCTCCAATGGGGGACCAGAGCTCTTCACTTATCCATGTCTGACTTTTGTCCTTGATTCTTTGAACGAACTCCATGACGTCTTTATCTACACTGCCTTCTATTCTATTCTGCGTAGGAATATTATTGGCATACTGCATCTGGATGGCTCATTTTCTCTTCTTGTTAAAGAACATGTATTCTTCCAGACGGAGCAGCGCTTGCGGCCATTCTTACGCGAGTCAATCCGCATATGAGGAACTGATGTGGGCCAACATTCTGTGGTATCTGAGGAAGTTGATGTTGGTGGGAATGCAGCGCATTGTTCCGCTGCCATTCAATATGGGGGACAGTATAGTTCTGTTTATGGTCCAGCTGCTTTGAGCGGTGCAAAGCAGATGGGCGTTGGGGTTATGGACATGTGGGAAACAGAAAAGTACCACTGTCTTGGTATTGAATGGTCATCTCATTACATCAGTCCTGCTGCTTTTATTTTTCCCGCTTGGAAGTTCAATTGTTGTCTTCTTTTTCTGTCGTTGTATGGAGATAAGGTTTTGTATTATGCTGGAATCAATAGATGGCAGTACGTTGAACGGCATAGTGCTTTTATCTACATGGGTCAGGACATACCTAATGATCCAAATGGACGATATGCTGCTTATCCTGAGGCAGCTTTGCTTGGCCAGGAGCAATCGCTGAAAGCTCAGTCTCTGCAATCTGCCTCACTCGATAGAAGTATTAGGGGTTTATGTGGCCAAAAAGAAAGGAAGGAAGGAAGGAAGAAAAAGGAAACAAAGACAGGAAAGAAATTTGATGATCTTAATTTAGCTAGGCAGCAAATGGGTAGGTCACCTTGCTGTGTGAAAGTGGGACTAAAGAAAGGGCCATGGTCTCCAGAGGAAGATCGAAAGCTCACTGCTTATATTCAACAGAATGGCCATGGAAACTGGAGTGCCTTGCCTGCCAAAGCTGCTCACTTACCCAAGAGAACAGACAACGAGATCAAGAACTATTGGAACACACACCTCAAGAAGAGGCTTACTAAAATGGGCATAGACCCCATGACCCACAAGCCAAAATTTGACCAGATCCTTCCCTCTGCCCTTCCCCAGTGCCAAGATGCTGCCTATCTCAGCCACATGGCTCAGTGGGAGACTGCTCGGCTCCAAGCTGAAGCTAGACTTGTCAGAGAATCCAAGTTCCAACTAGCCCCCAATCATCTCTCCTCCTGCTCTAAGCCGGCTCCATTTGTCCTGAAAAAAAACCCAGCTCAGCCTCCGCTACCACCAAGTTCATGGTCATGGTCACCATCATTACTACCAAGTAAGCCCGACAACAACGTTAATATGCATAACATGTACGCCGTTTTGCTCGCCACCAACGACTTCGACTCATCCAAATATGGCCACGCAAATCAAAACTTGTTGCCTTCTCCTAATAATGCCAATAGTCTGGATTTCACCAAAACCTCAGCTTCACGCCAAGCTGATTATGTCAAAGACGCAGAAGAATCGATCGGTGAAAAAGTAATGGAAGAGAATGGGTTGCTCCAGGACGATGACATTATGGTGGCTTTGGAAGCATTAAGAGCATCACCCTATAATAATACTAATAATATTTCAGTAGGGGCCTCAAACAGTGTTTTTGAAGGTCTTTGTGTGCCAGCTCATGATTCCTCCTATGAGAAAATAGAAGCAGGAAAAGGGTCAGATAATGAAAGCAGCTGCAACAGAAGCTTTGAGGACAATCTGGATTATTGGAACAACTTGCTGAACTTGGGTGAATAA 1770 0.4497 MPISNGGPELFTYPCLTFVLDSLNELHDVFIYTAFYSILRRNIIGILHLDGSFSLLVKEHVFFQTEQRLRPFLRESIRIXGTDVGQHSVVSEEVDVGGNAAHCSAAIQYGGQYSSVYGPAALSGAKQMGVGVMDMWETEKYHCLGIEWSSHYISPAAFIFPAWKFNCCLLFLSLYGDKVLYYAGINRWQYVERHSAFIYMGQDIPNDPNGRYAAYPEAALLGQEQSLKAQSLQSASLDRSIRGLCGQKERKEGRKKKETKTGKKFDDLNLARQQMGRSPCCVKVGLKKGPWSPEEDRKLTAYIQQNGHGNWSALPAKAAHLPKRTDNEIKNYWNTHLKKRLTKMGIDPMTHKPKFDQILPSALPQCQDAAYLSHMAQWETARLQAEARLVRESKFQLAPNHLSSCSKPAPFVLKKNPAQPPLPPSSWSWSPSLLPSKPDNNVNMHNMYAVLLATNDFDSSKYGHANQNLLPSPNNANSLDFTKTSASRQADYVKDAEESIGEKVMEENGLLQDDDIMVALEALRASPYNNTNNISVGASNSVFEGLCVPAHDSSYEKIEAGKGSDNESSCNRSFEDNLDYWNNLLNLGE 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1285 589 ProSiteProfiles Myb-like domain profile. 283 337 IPR001005 -
Glsi09g1285 589 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 283 341 IPR017930 -
Glsi09g1285 589 Pfam Myb-like DNA-binding domain 288 337 IPR001005 -
Glsi09g1285 589 SMART sant 287 339 IPR001005 -
Glsi09g1285 589 CDD SANT 290 337 IPR001005 -
Glsi09g1285 589 Gene3D - 285 343 - -
Glsi09g1285 589 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 318 474 - -
Glsi09g1285 589 SUPERFAMILY Homeodomain-like 282 347 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1285 Glsi-ChrGlsi09 9409209 9422708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1285 275 395 MYB Transcription Factor Family AT3G01140 52.353 2.87e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi09g1285 Myb_DNA-binding 1.5e-11 CL0123