Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1284 ATGGAGGGCAGAACGAGCTCTGATGTACTCCCTCCTGGCTTTAGGTTCCACCCAACTGATGAGGAACTGATCGTGTATTACCTTTGTAACCAAGCCACATCAAAGCCATGCCCTGCATCTATCATTCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTGCCAGACAAATCAGAGTTTGTAGAAAATGAGTGGTATTTTTTTACCCCACGAGACAGGAAGTACCCAAATGGGGTGAGACCTAACAGAGCAACTGTTTCTGGGTACTGGAAGGCTACTGGCACAGATAAAGCAATACACAGTGGGTCTAAGCATATTGGAGTGAAGAAAGCTTTGGTCTTTTACGAGGGTAGGCCACCAAAAGGTGTCAAGACAGATTGGATCATGCATGAATATCGACTTACTGAATCAAGAAGGCAAGCCAACAGGCAAATTAAATCCATGAGATTGGATGACTGGGTTCTGTGTAGGATCTATAAGAAGAAACAAATGGCAAAGGCATTAATGGAGCCGAAAGAAGAATATCCCACTGCCCAAGTCAATATAACAGCAGGAAATTATGGCAGTGAAGAACAAATGATGAAACTTCCCAGGACTTTTTCCCTTGCGCATCTTTTGGACATGGATTACTTGGGTCCAATATCGCAGCTATTTTCTGACGGTTCCTATATTTCAACCTCTGATCTTCAAAGTAACACTTCCAATTCTGGATATGGAATAGAGATGCCTAACCATCATCCAGAAGATTCAGGGAAGTTTCAAGTGAAACAGAGCAGCAGCACCGTCAACCAGCCAATATTTGTGAACCAAGTGTTTGATTTGCGAGGGTATGACCAAAATGAAAGAGATTGGATTGTTTAG 864 0.4259 MEGRTSSDVLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSEFVENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIHSGSKHIGVKKALVFYEGRPPKGVKTDWIMHEYRLTESRRQANRQIKSMRLDDWVLCRIYKKKQMAKALMEPKEEYPTAQVNITAGNYGSEEQMMKLPRTFSLAHLLDMDYLGPISQLFSDGSYISTSDLQSNTSNSGYGIEMPNHHPEDSGKFQVKQSSSTVNQPIFVNQVFDLRGYDQNERDWIV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1284 287 Pfam No apical meristem (NAM) protein 11 135 IPR003441 GO:0003677|GO:0006355
Glsi09g1284 287 PANTHER NAC TRANSCRIPTION FACTOR 56 10 208 - -
Glsi09g1284 287 SUPERFAMILY NAC domain 8 162 IPR036093 GO:0003677|GO:0006355
Glsi09g1284 287 ProSiteProfiles NAC domain profile. 10 162 IPR003441 GO:0003677|GO:0006355
Glsi09g1284 287 Gene3D NAC domain 19 167 IPR036093 GO:0003677|GO:0006355
Glsi09g1284 287 FunFam NAC transcription factor 19 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1284 Glsi-ChrGlsi09 9407936 9409012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1284 5 254 NAC Transcription Factor Family AT1G69490 62.454 8.53e-113 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi09g1284 NAM 5.6e-39 No_clan