Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1282 ATGGGTAGATCTCCATGCTGCCAAAACATGGGGTTGAAGAAAGGGCCATGGACACCGGAGGAAGACGAGAAGCTCACCGCTTACGTTCAAAAACTTGGCCATGCAAACTGGCGTTGGTTGCCCGCCAAAGCTGCCTATCTGAGACACATGGCTCGGCGGGAGAGTGCTCGACTGGAAGCAGAAGCAAGACTCGGATCCTCCTCCTTCTGCCTGCCTGCCAGCTCGGCTAATGGTAAGCAAAATCCCACCTCAACCTTCATAATTACCACCATTCCTAGACATACTAAAAGCATGCAAAGTTCTTGGGGACTACCAAGTAAAGATGACAATAACGGATCGTTGTATTACATGTACACCATCATGCTCCCCAATGATGATCGCCTTCTTGAGTCTCCGGCTTCCGTCTCCAAAGCCAAACTTCCAACTAATATCATAGAAACTAGCAGTAGTGGTGTTCCCAAACAAAACCCAAATGAAGAACTCAGAGAAAAGAGAGTGGAAGACGACCACCACGACTATATTATGGTGGCTGTGGAAGGATCAAGAAACGAAAGAAGAAAAATAAAGAAAATGAAAAAAGAATAA 585 0.4632 MGRSPCCQNMGLKKGPWTPEEDEKLTAYVQKLGHANWRWLPAKAAYLRHMARRESARLEAEARLGSSSFCLPASSANGKQNPTSTFIITTIPRHTKSMQSSWGLPSKDDNNGSLYYMYTIMLPNDDRLLESPASVSKAKLPTNIIETSSSGVPKQNPNEELREKRVEDDHHDYIMVAVEGSRNERRKIKKMKKE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1282 194 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 48 - -
Glsi09g1282 194 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 38 IPR017930 -
Glsi09g1282 194 Gene3D - 11 102 - -
Glsi09g1282 194 MobiDBLite consensus disorder prediction 146 168 - -
Glsi09g1282 194 Pfam Myb-like DNA-binding domain 14 38 IPR001005 -
Glsi09g1282 194 CDD SANT 16 38 IPR001005 -
Glsi09g1282 194 SUPERFAMILY Homeodomain-like 10 45 IPR009057 -
Glsi09g1282 194 ProSiteProfiles Myb-like domain profile. 9 48 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1282 Glsi-ChrGlsi09 9358446 9359577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1282 1 48 MYB Transcription Factor Family AT5G15310 66.667 5.23e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi09g1282 Myb_DNA-binding 7.9e-06 CL0123