Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1263 ATGTCGCCTAATGTTCTGGATAATAGAAGCGTGTCCATCATCGTCTTCCTTAACCTCACAAATGTCTACGAGATGAGAGTGGAAGTCTTTCCCCGAACCTTCGTCTCTCATTCGTTCCCAAAAACTTTTCAAAACCCTAACTTAAATCTCACAAGACCTCTCTTCACTTCCCTCAATGGCTCTCTACTCTTCAGACCCCTCGCCCAATTTTCCCACCAACCAAACACCCCTCCTTTTTCTCCCTCCGACTCTGGCCTCCTTTTCCGGGCAAAAATTATCTACCTCGAGAAACTCAACGTCAACTCGGACAAAGCACTTCGGGAAAATCCCAACTTCCGATCAGCTCCACTATCCTCCCTCAAATCTGTAGAAGACTGCCTCTTCTCCATGGGCATCGAGCGCTCTGCACTGGGTCGCATCCTCGACATGTACCCCCAGTTGCTCACATGCGACCCCTATTCCGATCTCTACCCCATTTTCGATTTCTTATTGAACGAGGTTGCAATTCCGTTCACTGACATTCGGAAATCGATCATACGGTGCCCGAGGCTATTGGTTTGTAGCGTGGATGAGCAACTAAGACCAGCTTTGTGCTTCTTGAGGAATTTGGGGTTTGTGGGGTCCAATTCCATCAATTCCCAGACCTCTTTGCTGCTGGTGTCAAATGTGGAGAGTACCCTCCTGCCCAAAATTGAGTATTTACAGAGTATGGGGTTTGCTTACGAGGAGGTGGTAAATATGGTTATAAGGTCACCTGGGTTGTTGACATTTAGTGTCAGTAACAATTTTGTGCCAAAGATGGAGTATTTTTTGAAGGAGATGAATGGGGACTTAGCTGAATTGAAGAGGTTTCCACAGTATTTTTCATTTAGTTTGGAGAAAAAGATTAAGCCAAGGCATAGGCTATTACTTGAGCATGGGTTTTCGCTTTCCTTGGCCGAGATGTTGAAGGTTAGTGATGGCGAGTTCAATGCTAGGTTGATTGAAATGCGATTAAAGTCACTAGATGGAAGGTAG 1017 0.4562 MSPNVLDNRSVSIIVFLNLTNVYEMRVEVFPRTFVSHSFPKTFQNPNLNLTRPLFTSLNGSLLFRPLAQFSHQPNTPPFSPSDSGLLFRAKIIYLEKLNVNSDKALRENPNFRSAPLSSLKSVEDCLFSMGIERSALGRILDMYPQLLTCDPYSDLYPIFDFLLNEVAIPFTDIRKSIIRCPRLLVCSVDEQLRPALCFLRNLGFVGSNSINSQTSLLLVSNVESTLLPKIEYLQSMGFAYEEVVNMVIRSPGLLTFSVSNNFVPKMEYFLKEMNGDLAELKRFPQYFSFSLEKKIKPRHRLLLEHGFSLSLAEMLKVSDGEFNARLIEMRLKSLDGR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1263 338 Pfam mTERF 173 323 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 Pfam mTERF 104 205 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 PANTHER CGI-12 PROTEIN-RELATED 238 329 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 Gene3D Transcription termination factor 3, mitochondrial 117 335 IPR038538 -
Glsi09g1263 338 SMART mt_12 245 277 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 SMART mt_12 138 170 IPR003690 GO:0003690|GO:0006355
Glsi09g1263 338 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1263 Glsi-ChrGlsi09 9016157 9017173 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi09g1263 mTERF 1.7e-30 No_clan