Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1241 ATGGCGGACAACGACAAACCTGGGCTGAAGCAAGTTGCGTGGAGTAAGGAACAGGATGCAAAGCTAATCGCATATTTTAAGAAATATGGTCATTCTGATTGGCGTCAGATACTCAAGTTTGCAGGTTTAGGAAGGTGGGGAAAAAGTTACAGACTTCATGAGGTGAATTACCTGCGCCGAAGTTTGAAACTTGGGAATTACACCCAAGAAGAAGAGCAAACAATCATCAAATTACATCAAGGCTTGGGAGACAAAATAGCCAACGATATAAAGATCTATTGGCATACCCATTTAAAGAAGCGATTAGATTACGGTGAAATGGCGTCTGAATTCATGGTGAAGCATAGTAATACATTCGAAGGAGAAATGAATCATTATGCAGAAACTGAAAACTCATTTTTGATAGCTTTCACATACCCATTAATGGAGCAAGTCAAGATAGCTCTCAAAACCGTCAACGGAGTAAACGAAGGAGACAATTCTAATTACTCAGATGGAAGGACAGATTCAGAGGGGGCTCTGGCCCCTCATGAACACAATTTCGGCAAGATAAGTGGGGCTCAGGCTGTGTCTGATGTTTTCATGTGCCTCGCAAACTTCCATGCCCTGCCATGCACGCCTTTTCTTCTGCAATGGGATTGTACTACAGAAGCAACTGCTTTTGTTTGTCAAATCTTCTTCCACGTATTTGTAAGGGGCAGCCAGCCCATACCCCAACAGCTTACAGCATCTCCTCTATTTTTCTCTGATTCTAACTTCCAGTCTGAGGGTGGTCTTTCAGCTGAGCTGCACTGGACTTCATTGCACAAATTCAATGAATCTTCCAACTACTGGTTGCCCCAACCTTCATTGGATCGGTTCTATATGGCAAAACCAAGTTCAGCAGATGGTAGGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTCTGTGCTGTTTCTTCTACATATTGGGTGCATGGCAGAGGAGCGGTTTTGGAAAGGGAGACAGCATAGCTTTGGAGATTACTAAGAATAATGCGGACTGTAATATAGTCCCTAGTTTAAGTTTCGACTCTCACCATGGAGGAGAAGTTAGCAAAATTGATGAATATGATTCGAAACCTAAGGTATTTAAACCATGTGACGCCCGTTATACTGATTACACTCCTTGCCAAGATCAACGGCGCGCCATGACCTTTCCAAGAGAAAACATGATCTATCGAGAGAGACACTGTCCTCCTGAGGAAGAGAAGTTACACTGTTTGATCCCAGCACCCAAGGGATATGTTACTCCATTTCCATGGCCAAAGAGCCGTGATTATGTTCCATATGCAAATGCACCCTACAAGAGCCTGACAGTTGAGAAGGCTATTCAGAACTGGATTCAATATGAGGGAAATGTGTTCAGATTCCCTGGTGGTGGCACCCAATTTCCTCAAGGTGCAGATAAATATATTGATCAGATCGCTTCTGTAATTCCTATAAGTAATGGGACAGTGAGGACAGCGCTTGACACTGGTTGTGGGGTTGCCAGTTGGGGTGCATATCTTTGGAGCCGAAATGTTATTGCCATGTCATTTGCACCAAGAGACTCTCATGAAGCACAAGTACAATTCGCTCTTGAAAGGGGAGTACCCGCTGTAATTGGTGTTCTGGGTACTATAAAGCTGCCTTATCCATCTGGAGCCTTTGACATGGCTCACTGTTCTCGCTGCTTGATACCTTGGGGAGCAAATGATGGAATGTATATGATGGAAGTTGACCGAGTTCTAAGACCCGGTGGTTATTGGGTGCTTTCGGGTCCGCCAATTAATTGGAAGGTTAATTACAAAGCCTGGCAGCGGCCTAAAGAGGAACTTGAGGAAGAGCAGAGAAAGATTGAAGAGATCGCTAGGCTCCTTTGCTGGGAGAAGAAGTCTGAGAAGGCTGAAATTGCTATTTGGCAGAAGACTGTAGACTCTGAATCATGTCGTAGAAGACAGGATGATTCTAGTGTAAAATTCTGTGAATCAACGGATGTTGATGATGTCTGGTATAAGAAAATGGAGGGCTGTGTTACTCCTAATTCTAAAGTTTCTGGCAGTGATCTTAAACCATTTCCAGAAAGGCTATATGCTGTTCCTCCTAGAATTGCTAGTGGCTCTGTTCCTGGAGTTTCTGTTGAGACATATCAGGATGATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAGAATTAATAAACTTCTGGATTCTGGAAGGTATCGCAACATTATGGATATGAATGCTGGATTAGGTAGCTTTGCTGCTGCAATTCAATCTCCTAAGTTATGGGTTATGAATGTCGTGCCCACTATAGCTGAGAAAAAGACACTGGGTGTCATATATGAGCGAGGACTGATTGGCATCTATCACGACTGGTGCGAAGCTTTCTCCACTTATCCAAGGACGTATGACCTCATTCATGCCCATGGTCTCTTTAGTCTGTACAAGGACAAATGTAATACAGAAGATATTCTTCTGGAGATGGATCGAATTTTGCGACCAGAAGGTGCTGTCATATTCCGTGATGAGGTTGATGTCCTAATTAATGTAAAGAAACTAGCAGGAGGAATGCGATGGGATACTAAAATGGTTGATCATGAAGATGGTCCTCTTGTTCCTGAGAAGGTACTAATTGCTGTCAAGCAGTATTGGGTTGCTGGTGGAAATGCCACATCTACACAATAA 2697 0.4308 MADNDKPGLKQVAWSKEQDAKLIAYFKKYGHSDWRQILKFAGLGRWGKSYRLHEVNYLRRSLKLGNYTQEEEQTIIKLHQGLGDKIANDIKIYWHTHLKKRLDYGEMASEFMVKHSNTFEGEMNHYAETENSFLIAFTYPLMEQVKIALKTVNGVNEGDNSNYSDGRTDSEGALAPHEHNFGKISGAQAVSDVFMCLANFHALPCTPFLLQWDCTTEATAFVCQIFFHVFVRGSQPIPQQLTASPLFFSDSNFQSEGGLSAELHWTSLHKFNESSNYWLPQPSLDRFYMAKPSSADGRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKNNADCNIVPSLSFDSHHGGEVSKIDEYDSKPKVFKPCDARYTDYTPCQDQRRAMTFPRENMIYRERHCPPEEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQIASVIPISNGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSGAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKAWQRPKEELEEEQRKIEEIARLLCWEKKSEKAEIAIWQKTVDSESCRRRQDDSSVKFCESTDVDDVWYKKMEGCVTPNSKVSGSDLKPFPERLYAVPPRIASGSVPGVSVETYQDDNKKWKKHVNAYKRINKLLDSGRYRNIMDMNAGLGSFAAAIQSPKLWVMNVVPTIAEKKTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHAHGLFSLYKDKCNTEDILLEMDRILRPEGAVIFRDEVDVLINVKKLAGGMRWDTKMVDHEDGPLVPEKVLIAVKQYWVAGGNATSTQ 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1241 898 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Glsi09g1241 898 Pfam Myb-like DNA-binding domain 13 57 IPR001005 -
Glsi09g1241 898 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 381 885 IPR004159 GO:0008168
Glsi09g1241 898 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 403 621 IPR029063 -
Glsi09g1241 898 SUPERFAMILY Homeodomain-like 8 87 IPR009057 -
Glsi09g1241 898 CDD SANT 13 42 IPR001005 -
Glsi09g1241 898 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 62 IPR017930 -
Glsi09g1241 898 Gene3D Vaccinia Virus protein VP39 449 659 IPR029063 -
Glsi09g1241 898 FunFam probable methyltransferase PMT2 449 647 - -
Glsi09g1241 898 SMART sant 10 60 IPR001005 -
Glsi09g1241 898 SMART sant 63 100 IPR001005 -
Glsi09g1241 898 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 731 847 IPR029063 -
Glsi09g1241 898 Gene3D - 12 63 - -
Glsi09g1241 898 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 309 888 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1241 Glsi-ChrGlsi09 8856691 8873798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1241 5 102 MYB Transcription Factor Family AT5G16770 50.459 4.43e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi09g1241 Methyltransf_29 5.4e-228 CL0063