Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1206 ATGGGAAAGACTCCTGGAAAATGGATCAAGACCTTACTTTTGGGGAAGAAATCATCAAAGTCTCAATCATCAAAAAAGAGAGATGCATTTAAACCTTCAATTAACAAGGAGGCGCTGGTATCTTCTGAGGCATATGTGTCTAATCCAACTGTGGATTCTTCGTTGATATCCCAACCCACTTCTGGTGTTAATGCAACTAAAGGAGCACTTTCTGAAAAGGACTTAGTTAGTGGATCATCAAATGACAAGGTTATTCTTTCAGCTAGAGATGAAGATACCAATGCACAAGCTGTTGTCAGTTTTGGTTCACAGGATGATCTTGACAAAATGAGGCTTAATCAAGCCGCTATAAAAGCTCAGGCTGCTTTTAGGGGCTATCAGGCTCGTCGATCATTTCGGTCACTCAAAGGTATCATACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTCAGAAGGCAAGCTATTTCTACTTTCTACTGTGTGAAAGGAATAGTTAAGTTTCAAGCATTGGCTCGTGGTCACAAGGTTAGGCGTTCTAATATTGGTCTTGCAGTTCATAAAATTCGCAAGGATACAAAATGTTCAAATGCTGTTGGAGTAGTTACATCTACGCAGGCAGAGAAGCTGTCAAAAAGTTTCTTTGTTCACACGCTTCTGGTTTCATCATCCTCTGCATTTCCTCTACATCTTAATTATGATCCTGGAGAACCTAACTTGGCTTGGGAGTGGCTTGACCGTTGGACAAGGTCGCACTTTTGGGCACCTAATTTAGAATTAAAAACAAAACTTGATTCAGTGTCTAATGAGAAAAATAGCAGTTGTCAGTCAGTAAAAAATAAGGAGGGCCAAGTAAAAAGAAATGCCCAGAAAGTGTCTGGTGTGAAAGTTGATGATGGCTCAATCTCAGATTCTAATAAATATAAACGGCATCCAAAAAAGGTTGCAACTCGCCCATTGCATTCAGCTCAGGAGCATCCACAAAAGGAAGTTGAGAAAAGTATTTTAAAGAAAACTCTTGTGCATTCTGATAGATCTGAGACTGCTAATGAGAAAAGAAAACACATTGTGAGAAAAAAATCTGGTCATACTGTCACTGATGTTCCAAAGCATGGCCCAAGTGTTTCTGCAGAAAAAATAAAAGATTTGGCTGTGCCAAAATCAAAACAGTCTGATCCTGAGCAAAGTCTTGGACGACAAGCAGAAGATGAACATGATAATCCTATAGCTGACTTGCAGACTAGAATGAACATTGGTAGAGAAGAAGGTATTCAAGGAGTCAATGAGGACTTGAACTGCGGTAACAGTTGTCCTAGCAGTGTGAGCCCTAAGAACTGCCAGAGAAGAGCTTCGCTGCCTATTAAGTTTGACAATCAAGATGATGGGGTACAAAACACTCCAAGACTGCCCAGCTATATGGCCCCGACCGAATCTGCAAAAGCTAGGCTAAGAGGACAAGGCTCCCCAAGGCTTGCTATTGACTTGGTAGAAAAAAATGGTATGACCAGGCGGCACTCACTTTCATCTTCAATTAATGGCAAGTTAGGTTCATTTTCTCCACAAGCTGAAGGACTTGTAGCCTTGAGCAGCAGGGGACTAATTAGGACTGACAGATCTCTGTCATCATCAAGGGATGTGACTGACAAGTTGATCCAACCTCAGTGGAGAAGAACTCCATTCTCTTACTCAATATTGAACTGTTTGGTGGAACTCCTGGAATCATCTGATGAGGATGATGCTGCTGCTGTTACAGAGATCAGTTTCTCTGCTAATTATGCTATCCAGTGTTTGGTGGAACTCCTGGAATCATCTGATGAGGATGATGATGCTGCTGCTACAGATATCAGTTTCTCTGCTAATTATGCTATCCAGTGGCCATATGAATTAGCAATATTGCAAACTGCAAAGCAGCGGCGACGTGTAGGGATCTCATTATTCCAGTCTCAAGTGCTTGGTGGTCGTTGGCCATTGGCAATGCAAGCCAAGGGGTTGGAGTTTAGCCAACTTCGGATTTGTTTACAAAGTATTCTCATTCTGTTCTTATGTAGATCTGAGGTGATAGATTCGGGAAAGGTTCAAACTGATGTGGAGGAAGCTAACAAAGACAAGGTGATTTTGTTGTTTAACGATAGAGATATTGACCAAGGATTGTGCAAATGTGGAAGGAGTTCGGTTGAAAATTTAATCACTTGGAAGCCAACTCACAAAAGGGTTTTGGAATCCACTTGGAGAATTTCACAAGGATTTTGA 2247 0.4143 MGKTPGKWIKTLLLGKKSSKSQSSKKRDAFKPSINKEALVSSEAYVSNPTVDSSLISQPTSGVNATKGALSEKDLVSGSSNDKVILSARDEDTNAQAVVSFGSQDDLDKMRLNQAAIKAQAAFRGYQARRSFRSLKGIIQLQALIRGHLVRRQAISTFYCVKGIVKFQALARGHKVRRSNIGLAVHKIRKDTKCSNAVGVVTSTQAEKLSKSFFVHTLLVSSSSAFPLHLNYDPGEPNLAWEWLDRWTRSHFWAPNLELKTKLDSVSNEKNSSCQSVKNKEGQVKRNAQKVSGVKVDDGSISDSNKYKRHPKKVATRPLHSAQEHPQKEVEKSILKKTLVHSDRSETANEKRKHIVRKKSGHTVTDVPKHGPSVSAEKIKDLAVPKSKQSDPEQSLGRQAEDEHDNPIADLQTRMNIGREEGIQGVNEDLNCGNSCPSSVSPKNCQRRASLPIKFDNQDDGVQNTPRLPSYMAPTESAKARLRGQGSPRLAIDLVEKNGMTRRHSLSSSINGKLGSFSPQAEGLVALSSRGLIRTDRSLSSSRDVTDKLIQPQWRRTPFSYSILNCLVELLESSDEDDAAAVTEISFSANYAIQCLVELLESSDEDDDAAATDISFSANYAIQWPYELAILQTAKQRRRVGISLFQSQVLGGRWPLAMQAKGLEFSQLRICLQSILILFLCRSEVIDSGKVQTDVEEANKDKVILLFNDRDIDQGLCKCGRSSVENLITWKPTHKRVLESTWRISQGF 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1206 748 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Glsi09g1206 748 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Glsi09g1206 748 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Glsi09g1206 748 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Glsi09g1206 748 PANTHER IQ-DOMAIN 5-RELATED 1 508 - -
Glsi09g1206 748 MobiDBLite consensus disorder prediction 266 282 - -
Glsi09g1206 748 MobiDBLite consensus disorder prediction 264 408 - -
Glsi09g1206 748 MobiDBLite consensus disorder prediction 373 387 - -
Glsi09g1206 748 MobiDBLite consensus disorder prediction 317 353 - -
Glsi09g1206 748 Pfam Protein of unknown function (DUF4005) 458 528 IPR025064 -
Glsi09g1206 748 Gene3D - 109 157 - -
Glsi09g1206 748 ProSiteProfiles IQ motif profile. 162 187 IPR000048 GO:0005515
Glsi09g1206 748 SMART iq_5 111 133 IPR000048 GO:0005515
Glsi09g1206 748 SMART iq_5 159 181 IPR000048 GO:0005515
Glsi09g1206 748 SMART iq_5 135 155 IPR000048 GO:0005515
Glsi09g1206 748 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1206 Glsi-ChrGlsi09 8611226 8622066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1206 1 556 IQD Protein Family AT1G14380 36.453 1.45e-91 296