Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1204 ATGAAGAATTTCTGGGTTTCTTTCTATTACTTGTTTCCTGTAATATTTCTTCTTCTGGTGCTTACTCCTATTTCCAGTGCACAGCTATCACCAAGCGAGAGTAGAATTCTATTCCAAGTTCAGAAACTTCTTGAATATCCTCCAGTTCTTCAACAATGGACGAACTGGACCAACTTCTGCTACCTCCCTCCTTCACCTTCTCTCAAGATTGTCTGCTCAAATGGTCATGTAACCGAATTAACTATCACTGGAAACAAAAGCTCCCCTTCCCACAGCCCAAAACCTCCTTCTTGGAATTCCCTTCAAACTCTTTCAGAAAGATTTTCCATTGATTCCTTCTTCACTGTCTTGACAAAGCTTTCAAACTTGAAGGTACTGTCACTAGTTTCCTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATCAACCGGCTCTGGTCGCTTAAAGTGCTGAACATTAGCTCAAATTTCATCTATGGGGAAATCCCATCATCAATCTCTTCCATGAAAAATCTCAGAAGTCTGGTTTTGGCTGATAATTTGCTCAATGGAAGTGTCCCAGATCTCAGAAGACTAGCTTCTCTTGAAGGGCTTAATCTGGGTGACAACAAACTAGGCCCTGAATTCCCTTCATTGGGCAACAATCTTATAAGCATAGTCTTGAGAAACAATTCTCTGAGGTCTAAAATTCCTTCAGAGTTCTTCAATCACTTTGACAAGCTTCAAAAATTTGACATCTCTTCCAATGAGTTTCTGGGAAACATTCCATCTTCTCTGTTTTCTCTTCCTTCCATTCGGTACTTAAATTTGGCTGAAAACCAATTAAGTGGTGCCATCTCAGTGAACACAGCCTGCAGTTCTTCTCTGACATTTGTGGATATCTCGCACAACCTTTTGGTAGAAAAATTGCCATCCTGCATTATCTTGTCGAAGTCCTCAAATCACACACTGTTATATTCTGGGAATTGTTTGTCAATGAGAGGGTTAAATGACCAGCACCCAACTTCATATTGCAAGAAAGAGGAGGCCTTAGCTGTTAAGCCTCCAGGTAGAAGTCAGAAGAAGGAGGGTATGAAACTAGGCCTAATACTTGGTATAATTGGAGGTATTGTAGGAATTGCAGTGCTTCTGGCTCTGCTCATTCTGCTCATCTTGAGGAAGTTCAAAGCAGAAAGAGCAGATAATCATTTAGACAGATCTGTTGCTGATAAATTTTCTGTCCATGCATCCCCAAGACCAAATATTGATACAAGACGTGTTCCTCAGACAGTGAGGCTAGCTGCAATTGGACTCCAACCGTACCGCATCTTCACGTTAGAGGAAATTGAAGAAGCAACAAACAACTTTGACCCATCAAATCTGATAGGAGAAGAATCTGAGGGAGGACAGCAATACAAAGGTAGGCTCAGGGATGGTTCAGTGGTCCTAGTTAACCGCGCGAAACTGAAGCAGAAGAACTTGCCCCAAAGCCTCATGATGCAGCACATGCAGGTGTTACCCAATTTAAGGCATAGGCACTTGGTGAGTGTTCTAGGACACTGTATCATAAATTACCAGGACCATCCTCAGACAACAAGCACAGTCTTCGTTGTCTTTGAACACATCTCAAATGGATCTTTGAGGGATCATCTTACAGATTGGAGAAAGAAGGAAATGCTGAAATGGCCACAAAGAATGGCGATCACCACAGGAATGGCAAGAGGAATCCAGTTCTTACACACAGGAATTGTTCCTGGCATATTTGGCAATAATTTAAAGATTCAGAACATTCTTTTGGATGGTAGTCTCAACGCAAAAGTTAGTGGATATAACATCCCGTTGTCATCCAAGAAAGGTTTGGAGAGCACAGTTTATGAACAAAGTGCCCCCGATAATTTTGGCAGCAGCACTGATAGTGCAGAAAAGGAAGATATATATCAGTTAGGTGTTATTCTACTTGAAGTTATTACGGGCAAACCAATTACATCTTCCAGTGAAATAGAGGTGCTGAAGGATGAGCTAGAGAAAGGTTTATCAGAAGCAGCATCAGTATTAAGGGGCGCAACCGACCCCTCCATCAGGGGAAGTTATGCATACGAATCATTGAGGACCACAGTTCAGATTACCATCAACTGCCTCAGCAAAGTTTCTAGTAAGCGTCCTTCAGTAGAAGACATTCTCTGGAATTTGCAGTACTCAATACAAGTCCAAGAGGCCTGGACCAGCAGTGGAAATCTCAGTACAAACTTGTAG 2229 0.4208 MKNFWVSFYYLFPVIFLLLVLTPISSAQLSPSESRILFQVQKLLEYPPVLQQWTNWTNFCYLPPSPSLKIVCSNGHVTELTITGNKSSPSHSPKPPSWNSLQTLSERFSIDSFFTVLTKLSNLKVLSLVSLGLWGPLPAKINRLWSLKVLNISSNFIYGEIPSSISSMKNLRSLVLADNLLNGSVPDLRRLASLEGLNLGDNKLGPEFPSLGNNLISIVLRNNSLRSKIPSEFFNHFDKLQKFDISSNEFLGNIPSSLFSLPSIRYLNLAENQLSGAISVNTACSSSLTFVDISHNLLVEKLPSCIILSKSSNHTLLYSGNCLSMRGLNDQHPTSYCKKEEALAVKPPGRSQKKEGMKLGLILGIIGGIVGIAVLLALLILLILRKFKAERADNHLDRSVADKFSVHASPRPNIDTRRVPQTVRLAAIGLQPYRIFTLEEIEEATNNFDPSNLIGEESEGGQQYKGRLRDGSVVLVNRAKLKQKNLPQSLMMQHMQVLPNLRHRHLVSVLGHCIINYQDHPQTTSTVFVVFEHISNGSLRDHLTDWRKKEMLKWPQRMAITTGMARGIQFLHTGIVPGIFGNNLKIQNILLDGSLNAKVSGYNIPLSSKKGLESTVYEQSAPDNFGSSTDSAEKEDIYQLGVILLEVITGKPITSSSEIEVLKDELEKGLSEAASVLRGATDPSIRGSYAYESLRTTVQITINCLSKVSSKRPSVEDILWNLQYSIQVQEAWTSSGNLSTNL 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1204 742 Gene3D Transferase(Phosphotransferase) domain 1 534 737 - -
Glsi09g1204 742 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 534 738 - -
Glsi09g1204 742 SUPERFAMILY Protein kinase-like (PK-like) 428 722 IPR011009 -
Glsi09g1204 742 Pfam Leucine rich repeat 214 274 IPR001611 GO:0005515
Glsi09g1204 742 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 30 213 - -
Glsi09g1204 742 Gene3D Ribonuclease Inhibitor 31 211 IPR032675 -
Glsi09g1204 742 Gene3D Ribonuclease Inhibitor 212 343 IPR032675 -
Glsi09g1204 742 ProSiteProfiles Protein kinase domain profile. 448 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1204 742 Pfam Protein kinase domain 473 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1204 742 Gene3D Phosphorylase Kinase; domain 1 414 520 - -
Glsi09g1204 742 SUPERFAMILY L domain-like 52 326 - -
Glsi09g1204 742 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1204 Glsi-ChrGlsi09 8603140 8607485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1204 25 663 Miscellaneous Gene Families AT2G02780 50.906 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Glsi09g1204 Pkinase 2.7e-16 CL0016