Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1201 ATGGAGAATTGTAAGGGAAACACTTGTCCAAAAAATACAGTTATGGAAGATCGTAGTAAGAACATCATGGAGTCTAACAGTGATGAAGAGATTGGTTGCAGTAAGGATCAAAAGCTTGAATCGGCCAAGGGGAAAATCGAAGAGGTTAGAGAAGAAAATGAGAGGTTGAAATCACTATTGTCACAGCTTGTGAAGGATTACCAATCACTGCAAATGCATTTCCTTGACATCCTTCAACAAGATCAACAACAACAAGGAGAAGATACTATCAAAGCTACAGGTACTGGCACTGCAGAAAATATTGAAGAAAATGAATTTGTCTCCCTTTCTCTTGGAATGACAATATCTAAAGCCCAGCCTACCATGGATGAAAAGAAGGGAGAAGATGATAAGTTGGATAAAGGGTTAGCACTTGGGTTAGATATCATTAGATTTGACCCTTCATTGGAAGCTTCAGCTGAAACTATAAATATTATTCCCATCCCTGAAAGTAACTCTAATGGGGAAGGGAAGGAAGAGGAAGCCAGTGCCATATTGCCACCCAGTAAAGCTCTGAAGACGATGAGAAGTGGGGACAATATTGAAGCTACTCTACAAACTCAGTTGAAGAAAGCTAGGTTTTCTGTCAGAGTCAGATGTGATACTCAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAAAAAATGGCCCGAGGAAACCCATGCCCCCGGGCATACTACCGATGCACTCTTTCTCCATCTTGTCCTGTGAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCCATCTTGATTACTACCTATGAAGGAACCCACAACCACCCTCTTCCTTTCTCAGCCACAGCGATGGCTTCCACAACTTCTGCAGTTGCTTCCATGCTCCAATCTCCCTACTTGAGCTCACAGCCAACCCTTGCCACTTCAGATACAGCCTTCACTACTGCTGCTAATAACCTTCATGCCCTAAACTTCTCTTCCTGCAGCCAAATTTCAAGACCACAGCAATTCTGCTTCCCCAACTTTTCCTCTTCAACCACCAATTCTCACCCCACAATCACACTTGACCTTACTGCGCCACCACTAACTTCATCTCATAATGCAAAGTTTGCTTCAGGCTTCTCTAACAATTCCATACCAAAATTTTCATCTAAAAGCCTCAATTTTGCCTCAAATTTCTATCCTTCACAGTCTAGCATCCCAGAGTCATGTTGGAACACTCATAGTGGTTACTTCAACTATGGAACAAAAACCCACGATAGAAACCAAAGTGGTTCCCTATTAAACTCTGGAAAACAGCCTTTTCAGGGGAATCTCCATCAACCCAATTACGTAAGCAACCATACCATTTCTCAAGAGACCATTTCAGCTGCAGCAACCAAGGCAGTCACAGTAAACTCCAAATCTCAATCAGCTTTAGCAGCTGCACTCACAACATACCTCAATAATAATGGACTTACTGGTGGAGATCATGGTGGTGAGAATAGTGGGCTAAAGTTGAAGCTTGGTGGTGATATGTACAGTTCTAGCCCAGATGCCATAGGTTATGCATCATCATCAAGGTACCTGAATGTGTCTTCTTCTGTTGCAAATGTAGCTCAACAGGGGAAGCTGGTCTTATTTCCGCCCTCATTGCCATCACCACCAGCGTCTAAAAGTGCCTCTGGTTCTCTATCTGATAGAAGTAACCAGCTCTTAGAGTATCGGAAGCGGCGTAATTAA 1725 0.429 MENCKGNTCPKNTVMEDRSKNIMESNSDEEIGCSKDQKLESAKGKIEEVREENERLKSLLSQLVKDYQSLQMHFLDILQQDQQQQGEDTIKATGTGTAENIEENEFVSLSLGMTISKAQPTMDEKKGEDDKLDKGLALGLDIIRFDPSLEASAETINIIPIPESNSNGEGKEEEASAILPPSKALKTMRSGDNIEATLQTQLKKARFSVRVRCDTQTMNDGCQWRKYGQKMARGNPCPRAYYRCTLSPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPFSATAMASTTSAVASMLQSPYLSSQPTLATSDTAFTTAANNLHALNFSSCSQISRPQQFCFPNFSSSTTNSHPTITLDLTAPPLTSSHNAKFASGFSNNSIPKFSSKSLNFASNFYPSQSSIPESCWNTHSGYFNYGTKTHDRNQSGSLLNSGKQPFQGNLHQPNYVSNHTISQETISAAATKAVTVNSKSQSALAAALTTYLNNNGLTGGDHGGENSGLKLKLGGDMYSSSPDAIGYASSSRYLNVSSSVANVAQQGKLVLFPPSLPSPPASKSASGSLSDRSNQLLEYRKRRN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1201 574 MobiDBLite consensus disorder prediction 25 46 - -
Glsi09g1201 574 FunFam probable WRKY transcription factor 31 203 280 - -
Glsi09g1201 574 SMART WRKY_cls 218 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1201 574 MobiDBLite consensus disorder prediction 544 574 - -
Glsi09g1201 574 ProSiteProfiles WRKY domain profile. 213 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1201 574 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 489 IPR044810 GO:0003700
Glsi09g1201 574 Pfam WRKY DNA -binding domain 219 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi09g1201 574 Gene3D WRKY domain 203 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi09g1201 574 Coils Coil 39 66 - -
Glsi09g1201 574 SUPERFAMILY WRKY DNA-binding domain 210 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1201 Glsi-ChrGlsi09 8582071 8585623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1201 46 486 WRKY Transcription Factor Family AT5G15130 38.641 4.97e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi09g1201 WRKY 7.5e-24 CL0274