Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1168 ATGGAGGGCTTTGATCTTTCGCCGGCAGATTCTGAAGAAGTTCATGTCTTGGCCGTTGATGACAGCCTCGTTGATCGGAAGGTCATCGAGCACTTGCTCAGAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATGAGAGCGCTGCAATTCCTGGGACTCCACGAGGAGAAAAGCTCCTCTGAATCGGATGGCTTTGATGGTTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAGTCGTCCACTTTCAGAGAAATTCCTGTGGTGATTATGTCCTCTGAAAACGTTTTGCCCCGTATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAACCAGTGAAGTTATCTGACGTGAAGCGCATAAAGCATTACATGACCACAAGAGAGGTTAAGGCGGGAAGTCAAGACACAGAAGGTGGTGGTGATGGTGGCGTGAGGATCAACAAAAGAAAGCTGCAAGATACCTCTGATCTGTTTTCATCACCACCGTCCCTTTCATCGTCGGCACTATCATCATCACCGTCATCGTCCCCTTCCTCTTCACCCTCCTCGCTTGATTCTCCAATCAGACGGCTTAAAATGACCACCACCGATTGA 654 0.4725 MEGFDLSPADSEEVHVLAVDDSLVDRKVIEHLLRISACKVTAVDSGMRALQFLGLHEEKSSSESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRIKHYMTTREVKAGSQDTEGGGDGGVRINKRKLQDTSDLFSSPPSLSSSALSSSPSSSPSSSPSSLDSPIRRLKMTTTD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1168 217 MobiDBLite consensus disorder prediction 173 217 - -
Glsi09g1168 217 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Glsi09g1168 217 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Glsi09g1168 217 CDD REC_typeA_ARR 16 140 - -
Glsi09g1168 217 MobiDBLite consensus disorder prediction 149 217 - -
Glsi09g1168 217 Gene3D - 14 178 - -
Glsi09g1168 217 SUPERFAMILY CheY-like 14 140 IPR011006 -
Glsi09g1168 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 182 IPR045279 GO:0009736
Glsi09g1168 217 SMART REC_2 14 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1168 Glsi-ChrGlsi09 8289943 8291017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1168 8 209 Response Regulator Gene Family AT1G59940 60.930 2.31e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi09g1168 Response_reg 1.1e-21 CL0304