Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1167 ATGGCTCTGAATTTGATGCCTCGGCGATGGTTTCTTGTGAGCCTTCTTTGTGTTTTTCAGAGTTTTGCAATACCGATATGTCATTCCCAGCTCAGTTCTCCTCAGAACATAGAAACTTCCTATCCCATTGAAGTTTCTTCACCCAATCCTCCAAAACAACTGCCAGAACCACCGCAATCAGCGGCAGTGTCCAAGAGTTCTTCGTCAAATAGTAAGATAGCAAAGGCAGTAGCTGCAACTGCAGCAGGCACTCTGGTTATGTCTGGTTTAATTTTTTTCTTACTTCCGAGGTGCTTCAGAGCAAGAAATGAGGCAGCCAACAATTCTACGCCCACAGATAGGCGTGTTGTGCCTCAAGCTCAGACAAATGTGTTTGAGCGAATTGATGGAAATGTGAGGGGTTTGATAGTTGATGAGAGTGGCTTGGATGTGGTTTATTGGAGAAAGCTTGAAGAGAAAAACTCTAAAATGGATTTCCAGAAAGAGGTTCTCCATAGATCTAGAAACAAAGAACGCCAAGAAGATGAGGAAGAAGGAACTCAAGGGAAAAAGTCTGATTCCATTCAAGAATTTCCTCTGCTTCGAGGGAAATCTTCGGCTTCCCACATAAATATAGTACCAGAAGAAGATGAGTCAAATCGAATTGCAAGAAGAACTCCCCCTTCTCCTCCTCTAAGTCTTTCTGCATCATCAATTCCAAAAACGAAAAGCCCTGCACCACCACGTTCTCCTCCTTTAAACCCAGGTAGAAGAAGTCAAGCACCGCCTCCTCCAACGTCAATCCCGGCTATAAAGAGTCCAACTCCGCCACCGAGTTTGAAGTCATCGTCAAAACCACCACCTACAACTTATGAAACGCCAGCTTCCACCAGTAACCCAGAGAACCCTTCAGGGGAAGGCATGTCGGAAAGCGGCAACGATCAAGCAAAGTTAAAGCCTTTCCATTGGGATAAAGTGAACACTAATACTGATCACTCTATGGTTTGGGACAAAATGGATAGTGATTCTTTCAGGATTGATCATGATCTTATGGAAGCTCTCTTTGGATACGTTGCCACCAACCGAAGATCCCCAAAAGGAAAGGGAAACTCAATGAGTCCAAGCGGGGATGCCTCTCCCCCATCAACAGAAACTTTTCTTCTTGATCCCAGAAAGTCACAGATCATTGCTATTGTTTTGAAATCTCTGGCAGCCTCGCGAGAAGAAATTCTTCATGCCCTCAAAGAGGGTCAAGGCCTTGATGCAGATACAATTGAAAAGCTTGCTAGAATTGCCCCAACAGAAGAAGAGCAATCTCGTATCATTGATTACAAAGAAGACCCAGCAAGACTTTCTGCTGCTGAGTCATTCCTCTATCACATACTCAAAGCTGTTCCTTCAGCTTTCAAGCGCTTGAACGCCATGCTCTTCAGGTTCAACTATGACTTTGAGGTTCTAGAAACCAAGGCATCTCTTCGGACCCTTGAGCTTGGGTGCAAGGAGCTTCGAAATCGAGGACTCTTTGTGAAGCTTCTTGAAGCAGTCCTTAAAGCTGGAAATCGTATGAATGCAGGTACTTCTAGAGGCAATGCTCAAGCTTTCAATTTGGGTTCTCTAAGGAAGCTCTCTGATGTCAAAAGCGCAGATGGAAAAACCACATTACTTCATTTTGTGGTTGAAGAAGTGGTCAGATCTGAAGGAAAACGCTGTGTTCTTAACCAAACTGGTAGCTTGAGTCGTAATAGCAGTAGAAGCAGGAACAGAAATGGGAATTCTGAGAACTCTTCTTCAGAAGAACAAAGGGAAAGGGAATATATAACTCTAGGATTACCAATTGTAGGAGGGATCAGTAATGATTTCTCCAATGTAAAGAAAGTAGCCCTTATAGATTATAGCAGTTTGGTTGGTTCAATATCTACCCTCTCAAATCGGCTGGTTGAAATTCGACAACTTGTTTCCCAGTGTAGAAATGGCAGAGGAGGAAAATTTGTGAAAGAAATGGACCATTTTCTTGAAAACGCAGAAAAGGAATTGAAATTGGTGAGAGATGAGCAAACAAGGGTAATGCAGATTGTAAAGAGAACAAGAGAATATTATGAAGGAGGAGCTTCAAAAGATATAACCGAACATTCTCTTGAAGTATTTGTCATAGTAAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATTGAGATTGCTCGTAATATGCAGAATAAGAGGATTACAGCCAAGGAAAGTTCAGGGTAA 2226 0.4281 MALNLMPRRWFLVSLLCVFQSFAIPICHSQLSSPQNIETSYPIEVSSPNPPKQLPEPPQSAAVSKSSSSNSKIAKAVAATAAGTLVMSGLIFFLLPRCFRARNEAANNSTPTDRRVVPQAQTNVFERIDGNVRGLIVDESGLDVVYWRKLEEKNSKMDFQKEVLHRSRNKERQEDEEEGTQGKKSDSIQEFPLLRGKSSASHINIVPEEDESNRIARRTPPSPPLSLSASSIPKTKSPAPPRSPPLNPGRRSQAPPPPTSIPAIKSPTPPPSLKSSSKPPPTTYETPASTSNPENPSGEGMSESGNDQAKLKPFHWDKVNTNTDHSMVWDKMDSDSFRIDHDLMEALFGYVATNRRSPKGKGNSMSPSGDASPPSTETFLLDPRKSQIIAIVLKSLAASREEILHALKEGQGLDADTIEKLARIAPTEEEQSRIIDYKEDPARLSAAESFLYHILKAVPSAFKRLNAMLFRFNYDFEVLETKASLRTLELGCKELRNRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLGSLRKLSDVKSADGKTTLLHFVVEEVVRSEGKRCVLNQTGSLSRNSSRSRNRNGNSENSSSEEQREREYITLGLPIVGGISNDFSNVKKVALIDYSSLVGSISTLSNRLVEIRQLVSQCRNGRGGKFVKEMDHFLENAEKELKLVRDEQTRVMQIVKRTREYYEGGASKDITEHSLEVFVIVKDFLGMVDQACIEIARNMQNKRITAKESSG 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1167 741 MobiDBLite consensus disorder prediction 41 67 - -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 237 277 - -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 278 304 - -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 161 184 - -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 354 379 - -
Glsi09g1167 741 PANTHER FORMIN-RELATED 11 730 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi09g1167 741 Gene3D Formin, FH2 domain 311 740 IPR042201 -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 357 379 - -
Glsi09g1167 741 ProSiteProfiles Formin homology-2 (FH2) domain profile. 301 741 IPR015425 -
Glsi09g1167 741 SMART it6_source 301 733 IPR015425 -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 567 594 - -
Glsi09g1167 741 Pfam Formin Homology 2 Domain 306 718 IPR015425 -
Glsi09g1167 741 Coils Coil 657 684 - -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 567 587 - -
Glsi09g1167 741 MobiDBLite consensus disorder prediction 161 309 - -
Glsi09g1167 741 SUPERFAMILY Formin homology 2 domain (FH2 domain) 314 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1167 Glsi-ChrGlsi09 8282734 8285059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1167 10 734 FH2 protein (formin) Gene Family AT1G70140 46.195 0.0 576