Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1156 ATGTCTCGCACGTGCTCACAGTGTGGCTGCAACGGCCACAACTCCCGTACATGCACCGACGGAAACGGCGGCGCCCCTTCCGCAGAGAACGGCATCTTACTGTTCGGCGTGCGAGTCACCCAAGGGAACTCATTTCGAAAGAGCGCTAGCATGACCGATCTCTCCCAGTACGAGCAGCCGCCGCCTCAGGATTCCAACGCCGACGCCGGTTACGCCTCCGACGACGTCGTCCACGCATCCGGTCGCAGCCGCGAGCGCAAGAGAGGTGTTCCGTGGACGGAGGAGGAGCATAGGTTATTCCTGATGGGGTTAAATAAGGTTGGGAAAGGAGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACTCGGACACCGACTCAGGTGGCAAGTCATGCTCAAAAATACTTCCTTCGCCGCCACAACCAGAACCGGAGACGCCGAAGATCTAGTCTATTTGACATCACCACCGATACGGTGATGGAATCCTCAATGCAAGAAGAGGTCCACCAAAAAGGAGCACCACCGACATATCTTCTGCAATCGCATTATGGTGGCTTTCCGATGAAGTTACCTCCGGCATCAGCTAAGGCGATTCTGCCAGTGGCTCCATCTTCGAAAATGGCTAATCTAAACTTGAAGGAGAAAGCTCATGTGACAGGACCTCTGCCATTATCGCTGAAGCTCCCAACACCCAGCAACGAGCAGTCAAGGACAAATAGCCGACCCTCCTCGTCGGGGGTGGCAGCCAGTTTTGAAGTGATGTCAGGGAAGTTGAGCAATGGTGGGGATGGCATGATCAGTGTTGCTTGA 810 0.5432 MSRTCSQCGCNGHNSRTCTDGNGGAPSAENGILLFGVRVTQGNSFRKSASMTDLSQYEQPPPQDSNADAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLMGLNKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSMQEEVHQKGAPPTYLLQSHYGGFPMKLPPASAKAILPVAPSSKMANLNLKEKAHVTGPLPLSLKLPTPSNEQSRTNSRPSSSGVAASFEVMSGKLSNGGDGMISVA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1156 269 PANTHER TRANSCRIPTION FACTOR KUA1 1 230 - -
Glsi09g1156 269 Gene3D - 90 141 - -
Glsi09g1156 269 SMART sant 88 138 IPR001005 -
Glsi09g1156 269 MobiDBLite consensus disorder prediction 50 71 - -
Glsi09g1156 269 MobiDBLite consensus disorder prediction 221 269 - -
Glsi09g1156 269 MobiDBLite consensus disorder prediction 226 250 - -
Glsi09g1156 269 SUPERFAMILY Homeodomain-like 86 139 IPR009057 -
Glsi09g1156 269 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Glsi09g1156 269 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Glsi09g1156 269 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Glsi09g1156 269 FunFam transcription factor MYB1R1 90 141 - -
Glsi09g1156 269 CDD SANT 91 136 IPR001005 -
Glsi09g1156 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Glsi09g1156 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1156 Glsi-ChrGlsi09 8212466 8213463 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi09g1156 Myb_DNA-binding 5.8e-11 CL0123