Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1148 ATGGGTCGGAATTCCAACCACATCAAGCAAATACCTTCGTCTCGAACGGTTCGCCTCGGCTCAGTCCAGCCTCAGGCCCCGATGTACCGCACCGTTTTTTGCAACGATCGCGAGGCCAATCTTTCCGTCCGATTTAAGGGGAACTCGATATCAACTACAAAATATACCATTTTCACTTTCTTGCCAAAAGGACTGTTTGAACAGTTCAGGCGGGTCGCTAATCTCTACTTTCTTGCAATCTCAATTTTAGCAACAACACCAATCAGTCCTGTGTCTCCAATAACTAATGTGCTTCCTCTGTCTCTGGTGCTTCTTATCTCTCTTATCAAGGAAGCTTTTGAGGACTGGAAGCGTCTTCAAAATGACATGGCCATAAACAATAATATGATAGATGTTTTGCAAGATCAAAAGTGGGAGTCCGTACCCTGGAAAAGCCTGCAGGTTGGAGACATTGTCAGGGTTAAGCAGGACGGATTTTTTCCATCAGATTTACTTTTCTTGGCTAGTACAAACGTAGATGGTGTCTGTTACATTGAGACTGCTAATTTGGACGGGGAAACCAATTTGAAAATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGATTTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTATACTTTCACTGGAAATCTTATAATTCAAAAGCAAACACTGCCTCTCAGTCCAAACCAAATTTTGTTGCGAGGATGCAGTCTCAGAAATACAGAGTATATTGTTGGAGTAGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCCATGAATGTTCCTTCTAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTCACTCTATTTGCAACTCTCTTTTGCATGTGTTTTATTGGAGCCATAGGCAGTGGCATCTTTGTAAATGACAAGTATTTCTACTTACGCCTCGATGCCAATGATGATGGCTCAAAGCTGTTCAACCCAAGAAACAGATTTCTGGTTATCATTCTGACTCTGTTTACCCTCATCACTCTATACTCAACACTAATCCCCATTTCCCTTTATGTATCAATAGAGATGGTCAAATTTATTCAATCGACTCAATTTATCAACAAGGATTTGTACATGTATCATAATGAAACCAATACCCCAGCATTGGCCAGAACTTCTAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACTGGGACTTTAACAAGAAACTTAATGGAGTTTTTTAAGTGTTCAATTGGAGCCGAGGTATATGGAAATGGTGTTACTGAAATTGAGAGGGGAATCGCAGAGCGTAATGGCATGAAAGTTGAGGAAAATATATCAGCCACTGCAGTGCGAGAGAAGGGTTTTAATTTTGATGATGATAGGCTTCTGAAAGGAGCTTGGAGGAATGAGCCTAATCCTGATATTTGCAAGGAATTCTTTAGATGCCTTGCTATATGCCATACTGTACTTCCCGAGGGCGATGAGTCCCCTGAAAAGATCAGGTATCAAGCCGCATCACCTGATGAGGCTGCTTTGGTCGTTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGACGCACACCTACAACTATATATGTTCGTGAATCTAATGTTGAGAAGATGGGTAAAATTCAAGATATGGCTTACGAAATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGCCGGTATCCAGATGGGAGGCTTGTATTATACTGTAAGGGTGCCGATACAGTAATCTATGAGAGATTGGTTGATGGTAATCATGACATAAAGAAATTGACAAGGGAGCATTTGGAATATTTTGGAGCTTCTGGACTACGTACATTATGCCTGGCCTACAAAGAATTACATCCCGATGCATATGAAAGCTGGAATGAGAAGTTCATCCAGGCCAAGTCTTCCCTAAGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGATTTTATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTTCCAGCATGTATAGAGACTCTTCAAAGAGCTGGCATTAAAATATGGGTGCTTACAGGAGACAAGATTGAAACAGCAATTAATATAGCCTATGCATGCAATTTAATAAACAATGAGATGAAACAATTTATTATCAGTTCAGAAACTGATGCAATCAGAGAAGTCGAAGACAGGGGTGACCAAGTGGAAATTATGCGTTTTATTAAAGAAGAAGTGAAAAAAGAATTGAAGAAGTGCCTTGAGGAAGCACAGAGCTATCTTCGCTCTCTATCTGGACCAAAATTAGCACTTGTAATTGATGGGAAATGTCTCGTGCATGCATTAGATACAAGTTTAAGAGCGATACTGCTGAATTTGAGTTTGAATTGTCATGCAGTTGTTTGCTGTCGAGTTTCTCCCTTACAGAAAGCACAGGTCACAAGGCTAGTCAAGAAAGGTGCAAGGAAAATAACACTTGGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGCTGGAAGGAATGCAAGCTGTTATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTACGGATTTACTTCTTGTTCATGGCCGGTGGTCGTATCTTCGAATATGCAAGGTGGTTATATACTTCTTTTACAAGAATCTTACGTTCACTCTTACTCAGTTTTGGTATACTTTTCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACAGCACTGCCTGTGATCATTGTGGGACTGTTTGACAAGGATGTCAGTGCATCTCTTTCCAAGAAGTACCCTGAACTATACCAAGAGGGGATAAAAAATGTCTTTTTCAGATGGAGAATTGTGGCAATATGGGCTTTTTTTTCCGTCTACCAGTCTCTAATATTCTTCTATTTTGTGAGTTCATCTACTTTAAGTGCTAAAAATTCGGCAGGCAAAATATTTGGACTCTGGGATGTCAGTACAATTGCCTTCACATGTGTTGTAATAACTGTCAATTTGCGACTTCTTATGATTTGTAATTCGATCACGAGATGGCACTACATTGGTGTTGGTGGAAGTATACTAGCATGGTTTATTTTTGTTTTAATATATACAGTAATCAGACAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACATTCTATTTCTACCTCACCCTTCTTCTTGTCCCCATTGTTGCACTTTTTGGTGACTTTGTTTACCAAGGGATTCAAAGATGGTTCTTCCCCTATGATTATCAGATTATTCAGGAAATGCATAGACACGAGACTGATAGCAGCAGGACACAGCTGCTGGAGAGAGGGAACCATCTTACGCCAACTGAGGCAAGAAGCTATGCCATTTCTCAACTCCCACGTGAGAAATCAAAGCACACCGGGTTTGCTTTTGATTCACCTGGGTACGAGTCCTTTTTTGCTTCGCAGCTAGGTGTATATGCTCCACAAAAGGCATGGGATGTTGCAAGACGAGCTAGCATGAGGTCACGGCTAAAGATAGGCCAGAAAAAATAG 3624 0.402 MGRNSNHIKQIPSSRTVRLGSVQPQAPMYRTVFCNDREANLSVRFKGNSISTTKYTIFTFLPKGLFEQFRRVANLYFLAISILATTPISPVSPITNVLPLSLVLLISLIKEAFEDWKRLQNDMAINNNMIDVLQDQKWESVPWKSLQVGDIVRVKQDGFFPSDLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASDFKGEIQCEQPNNSLYTFTGNLIIQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFATLFCMCFIGAIGSGIFVNDKYFYLRLDANDDGSKLFNPRNRFLVIILTLFTLITLYSTLIPISLYVSIEMVKFIQSTQFINKDLYMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGAEVYGNGVTEIERGIAERNGMKVEENISATAVREKGFNFDDDRLLKGAWRNEPNPDICKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVVAAKNFGFFFYRRTPTTIYVRESNVEKMGKIQDMAYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLVDGNHDIKKLTREHLEYFGASGLRTLCLAYKELHPDAYESWNEKFIQAKSSLSDREKKLDEVAELIENDFILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVEIMRFIKEEVKKELKKCLEEAQSYLRSLSGPKLALVIDGKCLVHALDTSLRAILLNLSLNCHAVVCCRVSPLQKAQVTRLVKKGARKITLGIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLTDLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWYTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYQEGIKNVFFRWRIVAIWAFFSVYQSLIFFYFVSSSTLSAKNSAGKIFGLWDVSTIAFTCVVITVNLRLLMICNSITRWHYIGVGGSILAWFIFVLIYTVIRQENIYFVIYVLMSTFYFYLTLLLVPIVALFGDFVYQGIQRWFFPYDYQIIQEMHRHETDSSRTQLLERGNHLTPTEARSYAISQLPREKSKHTGFAFDSPGYESFFASQLGVYAPQKAWDVARRASMRSRLKIGQKK 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1148 1207 PRINTS P-type cation-transporting ATPase superfamily signature 410 424 - -
Glsi09g1148 1207 PRINTS P-type cation-transporting ATPase superfamily signature 841 860 - -
Glsi09g1148 1207 NCBIfam HAD-IC family P-type ATPase 814 920 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi09g1148 1207 FunFam Phospholipid-transporting ATPase IC 407 419 - -
Glsi09g1148 1207 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 635 IPR023299 GO:0000166
Glsi09g1148 1207 NCBIfam phospholipid-translocating P-type ATPase 45 1122 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi09g1148 1207 Gene3D - 535 660 IPR023299 GO:0000166
Glsi09g1148 1207 Pfam Phospholipid-translocating ATPase N-terminal 32 96 IPR032631 -
Glsi09g1148 1207 Gene3D - 110 274 - -
Glsi09g1148 1207 Pfam Cation transport ATPase (P-type) 507 601 - -
Glsi09g1148 1207 SFLD C1.7: P-type atpase like 392 892 - -
Glsi09g1148 1207 Coils Coil 756 776 - -
Glsi09g1148 1207 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 26 1162 - -
Glsi09g1148 1207 SUPERFAMILY HAD-like 398 883 IPR036412 -
Glsi09g1148 1207 Pfam Phospholipid-translocating P-type ATPase C-terminal 869 1114 IPR032630 -
Glsi09g1148 1207 FunFam Phospholipid-transporting ATPase 674 881 - -
Glsi09g1148 1207 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 1114 IPR023298 -
Glsi09g1148 1207 FunFam Phospholipid-transporting ATPase 106 275 - -
Glsi09g1148 1207 ProSitePatterns E1-E2 ATPases phosphorylation site. 412 418 IPR018303 -
Glsi09g1148 1207 SFLD p-type atpase 392 892 IPR044492 -
Glsi09g1148 1207 Pfam E1-E2 ATPase 127 365 - -
Glsi09g1148 1207 CDD P-type_ATPase_APLT_Dnf-like 47 1001 - -
Glsi09g1148 1207 Gene3D - 671 881 IPR023214 -
Glsi09g1148 1207 FunFam Phospholipid-transporting ATPase 518 673 - -
Glsi09g1148 1207 SUPERFAMILY Calcium ATPase, transduction domain A 127 271 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1148 Glsi-ChrGlsi09 8132681 8174245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1148 4 1206 Primary Pumps ATPases AT1G59820 78.164 0.0 2028