Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1129 ATGCCTCTACCGTCATCATTGAGCGTTCGCTGCTTCATACTATGCTTTGTAGTAGAATTGTCGTCCTCTGTTTTGGCTGCTGCTCACACATGCTCTTCAAACCCAGACCCATCTGCATTTCCTTGTCCACCATTCACTTCCAGTCCTCCTTTTCCATTCTCTTTCTCACCTGGGTGTGGCCACCCTTCCTTCCAGATCAAGTGCTCTTCTCCCCATTCTCTCATCTCCATTAACAATCTTTCTTTCTCTGTTCTTCGTTATGACCCCAACTCCTCCTCTCTTGTCCTCTCCCCTCGACCCTCAAGTGCATCCGATGCGACGGCCTTACCGGCTTACAAAAACTGCCCCTCTCACTTTCTTTCTATTCCGAATCGTTCTATCAATCTTACTGGTTCGCCTTTCCGAGTTTCCGATGCTTCATGTTCTCGCCTCTCTTTTCTCCAACCTTGCTCGCCTCCAACTCTACCGAACTGTAGCCATTGCCCATGGGAATGCAAGCTCGTAAAGAACCCAGCTCAGCTTCTTCATGATTGTGGATCTGTGCACCGCTCCGTCTCAGACTCCGACCATGACTGCCAAAGCGACGTTTTGGGATATCTCGACAAAATGTTGACATTGGGAATCGAGGTCGAGTGGGACGAAGCACAGGATCCTTACTTTTCAAGCTGCAAAGATTGCCGAGCAAACAAGGGCGTTTGCGGCTTCAATTTATCAGACCCTGGCAACCAATTCATCTGCTTTCACTCCCAATCTAGCATCTCACCACATTGGATTCGTAAGGTCAATCCCAATCGAATGGCTATTTTGTCCCTTGTAATCGCATTGATGTCGTTGCTGCTTGTTGTTTCGGTTGCCACGGCTATTTTCCGCTCCAGGCGGTTCAAATCAGCTGCTACAGAGGAAGACCCAACAATACTTTTCCTTCATAATCAGCGCTCTGCCAGTCCTCTTCCTCCTGTTTTCACCTACGAAGAGTTGGAGTCTTCCACCAACCATTTCGACCCCAAGCGCAAAATTGGCGATGGTGGGTTTGGGTCGGTGTACCTGGGACAGCTCCACGATGGCCGAATCGTCGCGGTGAAGTACCTCCACAAGCAGCAAGCCGAGGCCGCCGCGGGACGAGCTTTTTCCACCAAGTCATTCTGCAACGAAATTTTGATTCTCTCTTCCATTGATCACCCAAATCTTGTCAAGCTTCATGGGTATTGCAGCGATCCAAGAGGGCTGCTTCTGGTATATGATTATGTCCCTAATGGAACTTTAGCAGACCATCTCCATGGCCCAAAGAGCTTATACCGAAAAGGGTCTTTGAAATGGCAAGTGAGGCTCGATATTGCACTGCAAACAGCATTGGCCATGGAGTACCTTCACTTTTCAGTTGCGCCTCCCATAGTTCACAGAGATATCACCTCATCCAACATCTTCGTAGAGAAAGACATGAGAATCAAAGTTGGGGACTTTGGACTTTCTAGGCTATTGGTTTTGCAGGATACGTCGTCGTCTTCAACTGGGTATGTCTGGACGGGGCCCCAAGGTACACCGGGGTATTTGGATCCTGAATACCACCGATCGTTCCGGTTAACGGAGAAAAGCGACGTGTATAGCTTCGGAGTGGTGTTGTTGGAGCTGGTTTCCGGGTTGAAAGCGGTGGACCAGAGGAGGGACAAGCGTGAAATCGCCTTAGCTGATCTGGTGGTGTCAAGAATCCATATGGGTCAGCTGCGCCAGGTGGTGGACCCAGCCCTGGCGACGGAGGAGGAAGCGATGGACTCCGTGGCCGCGGTGGCAGAGTTGGCATTCCGGTGCGTGGCGGCTGATAAGGACGACCGCCCAGATTCGAGGGAGGTGGTGGAGGAGTTGAAGCGGGTTCGGAGCCGAGCACGAGGTGGACTCCTGTCCTCGTCGAATTCCAACGTGGGTGCTGAGGTGGCCAATAACTGTGAAGGGTTGTGA 1953 0.5105 MPLPSSLSVRCFILCFVVELSSSVLAAAHTCSSNPDPSAFPCPPFTSSPPFPFSFSPGCGHPSFQIKCSSPHSLISINNLSFSVLRYDPNSSSLVLSPRPSSASDATALPAYKNCPSHFLSIPNRSINLTGSPFRVSDASCSRLSFLQPCSPPTLPNCSHCPWECKLVKNPAQLLHDCGSVHRSVSDSDHDCQSDVLGYLDKMLTLGIEVEWDEAQDPYFSSCKDCRANKGVCGFNLSDPGNQFICFHSQSSISPHWIRKVNPNRMAILSLVIALMSLLLVVSVATAIFRSRRFKSAATEEDPTILFLHNQRSASPLPPVFTYEELESSTNHFDPKRKIGDGGFGSVYLGQLHDGRIVAVKYLHKQQAEAAAGRAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGPKSLYRKGSLKWQVRLDIALQTALAMEYLHFSVAPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVLQDTSSSSTGYVWTGPQGTPGYLDPEYHRSFRLTEKSDVYSFGVVLLELVSGLKAVDQRRDKREIALADLVVSRIHMGQLRQVVDPALATEEEAMDSVAAVAELAFRCVAADKDDRPDSREVVEELKRVRSRARGGLLSSSNSNVGAEVANNCEGL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1129 650 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 630 - -
Glsi09g1129 650 Gene3D Transferase(Phosphotransferase) domain 1 416 638 - -
Glsi09g1129 650 SUPERFAMILY Protein kinase-like (PK-like) 313 620 IPR011009 -
Glsi09g1129 650 CDD STKc_IRAK 339 622 - -
Glsi09g1129 650 FunFam Putative serine/threonine-protein kinase At1g18390 family 309 415 - -
Glsi09g1129 650 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Glsi09g1129 650 Pfam Protein kinase domain 335 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1129 650 ProSiteProfiles Protein kinase domain profile. 333 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1129 650 Pfam Wall-associated receptor kinase C-terminal 173 249 IPR032872 -
Glsi09g1129 650 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Glsi09g1129 650 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 627 IPR044652 GO:0004672
Glsi09g1129 650 ProSitePatterns Tyrosine protein kinases specific active-site signature. 464 476 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1129 Glsi-ChrGlsi09 7948771 7950723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1129 10 628 Receptor kinase-like Gene Family AT1G69910 63.108 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1129 Pkinase 2.5e-44 CL0016