Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1106 ATGGTGATAGAGAGCCTTCAGACCAAATCGCTATCTTCGTTGAGCACAGTCCTGTCTTGTCTCTCTGCTAGCACTCTCGCTACAAAGCATTCCGGCGACTTCTCCGATCACGTTCTGGCAACGGTTCCATCGAAACCATGGGAAGAGAATGAGGAACTGCCGGCGATCATCATGTCGGTTTCCTGCACTGACTACTTCCCCGATTCCGACCTTCTTTGCGACGAGGACACCTCCGGAATCCTGTCCGGAGAGTCGCCGGAATGCTCCTCCGACCTCGATTCCTCTCTGTCGTCCACGGAGGAGTCGATTGCCGAATTCATGGAAGGCGAGCGCAACTTCGTTCCCGGAGTCAACTACTTGTCCAGGTTTCAATCTCACTCGCTTGACGCCTCCGCCAGAGAAGAATCTGTTGCATGGATTCTCAAGGTACAAGCATATTATGGCTTTCAGCCACTGACGGCGTATCTTTCCGTCAACTACATGGATCGGTTTTTGGATTCTCGGCGGTTGCCGCAAACAAATGGGTGGCCACTGCAACTTCTGTCTGTTGCTTGTTTGTCTTTAGCTGCAAAGATGGAGGAACCTCTAGTTCCGTCCCTTTTGGATCTTCAGGTAGAAGGTGCCAAATATATATTTGATCCGAAGACAATTTGTAGGATGGAACTACTTGTTCTGGGTGCTTTGGATTGGAAACTAAGATCAGTCACGCCGTTCAGCTTCCTCGGTTTCTTCGCGTGCAAGCTCGATTCAACTGGAACTTTTACTGGGTTCCTCATTACACGGGCTACAGAAATCATCTTATCTAATATCCAAGAGGCTAGTTTTCTTGCGTACTGGCCATCATGCATTGCTGCCGCGTCCATACTCTCTGCAGCGAATGAAATTCCCAATTGGTCTCTCGTCAAGCCTGAGCATGCTGAGTCATGGTGTGAGGGGCTTCGAAAAGAGAATATTATAGGCTGCTACCAGTTGATGCAAGAACTTGCGATTAACCATTACCAGAGGAAGCCCCTTAAAGTGTTCCCACAGCTTCGAGTAACTACTCGGCTCAGAATGAGGTCAAGTATGTCATCATTCTCATCGTCCTCCTCTTCTTCCTCTTCCTCATCATCTTATAAGAGGAGGAAATTAAATAACGGCTTGTGGGTAGACGATGACAAAGGAAACTCCGAATGA 1176 0.4855 MVIESLQTKSLSSLSTVLSCLSASTLATKHSGDFSDHVLATVPSKPWEENEELPAIIMSVSCTDYFPDSDLLCDEDTSGILSGESPECSSDLDSSLSSTEESIAEFMEGERNFVPGVNYLSRFQSHSLDASAREESVAWILKVQAYYGFQPLTAYLSVNYMDRFLDSRRLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFDPKTICRMELLVLGALDWKLRSVTPFSFLGFFACKLDSTGTFTGFLITRATEIILSNIQEASFLAYWPSCIAAASILSAANEIPNWSLVKPEHAESWCEGLRKENIIGCYQLMQELAINHYQRKPLKVFPQLRVTTRLRMRSSMSSFSSSSSSSSSSSSYKRRKLNNGLWVDDDKGNSE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1106 391 Pfam Cyclin, C-terminal domain 235 349 IPR004367 -
Glsi09g1106 391 SMART cyclin_7 138 226 IPR013763 -
Glsi09g1106 391 SUPERFAMILY Cyclin-like 217 344 IPR036915 -
Glsi09g1106 391 CDD CYCLIN_AtCycD-like_rpt2 235 325 - -
Glsi09g1106 391 SMART Cyclin_C_2 235 368 IPR004367 -
Glsi09g1106 391 Gene3D - 106 296 - -
Glsi09g1106 391 Pfam Cyclin, N-terminal domain 104 232 IPR006671 -
Glsi09g1106 391 Gene3D - 116 233 - -
Glsi09g1106 391 PANTHER CYCLINS 87 331 IPR039361 -
Glsi09g1106 391 CDD CYCLIN_AtCycD-like_rpt1 132 230 - -
Glsi09g1106 391 FunFam D2/4-type cyclin 116 233 - -
Glsi09g1106 391 ProSitePatterns Cyclins signature. 133 164 IPR006671 -
Glsi09g1106 391 SUPERFAMILY Cyclin-like 97 232 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1106 Glsi-ChrGlsi09 7696089 7701510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1106 58 390 Core Cell Cycle Gene Families AT1G70210 62.315 4.86e-130 375