Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1097 ATGAAGCAGCAGTTTGTATTTCCCTATCAAACTAAACAGACCCCACGATTTCCCACCATAGGTAAGCAGGCCGTACCTACTTTTCCTTTCTCTGTTCCTTTAAGTACATATCTCTTCCTCTCACCTTGTGCTGTTTGTGTTCCTGAAAAATTCAGGTTGTTGGAAGATGTGTCATTGAGTAGAGCGATCATGCCATTTGGGTTGGTCTCATCCTGGAGCAAGCGTCGGAGAAGCAAGTCTCAAGATCATACAGACCCCTGGATTTACAAACCCATGGAGTTTTGGCAACTTGAAGATCAAGCACCACGGCCTCCAAAAAGGCAGCACGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAATGATGATAATCTGCTTGGAAAAGGAGGATTTGGAAGAGTCTACCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGCTGCCAGCAATTAAAGAAGCAGAGGGAGAGCGTGAGTTCCGTGTTGAAGTTGACATCTTGAGCAGACTTGACCACCCAAATCTTGTTTCTTTAATAGGCTATTGTGCTGATGGAAAGCATAGATTCCTAGTATACGAATATATGCATAATGGAAACCTGCAAGATCATTTAAATGGAATTGAGCAAAGAAAAATGGATTGGCCTCAGAGACTCAAAGTGGCACTGGGAGCTGCTAAAGGTCTTGCATATCTCCATTCAAGTTCTGCTGTTGGAATTCCTATTGTCCATAGAGATTTCAAATCCACCAATGTCCTCTTAAATATCAACTTTGAAGCAAAGATATCTGATTTTGGGCTGGCCAAGTTAATGCCAGAAGGGCAAGAGGAGACACACGTGACTGCCAGAGTTCTTGGTACCTTTGGCTACTTTGATCCTGAATATACATCGACTGGTAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTTGAGCTTTTCACTGGACGTCAAGCTGTAGATTTAAACCAGGGTCCAAATGATCAAAACCTTGTATTACAGGTGAGGCACATACTGAATGACCGCAAGAAGCTCCGTAAGGTGATAGACCCAGAAATGGCTCGAAATTCTTACACCATTGAGTCTATAGCCATGTTTTCCAATCTGGCATCACGATGTGTCCGTACTAACAGTAGTGAGAGACCTTCTATGGCAGAATGTGTAAAAGAGCTGCAAATGATTATCCATACAAATTCAAAAGGCTTGGCAATGGTTATGCATAGTTTGAGAATGATATAG 1278 0.4257 MKQQFVFPYQTKQTPRFPTIGKQAVPTFPFSVPLSTYLFLSPCAVCVPEKFRLLEDVSLSRAIMPFGLVSSWSKRRRSKSQDHTDPWIYKPMEFWQLEDQAPRPPKRQHGSSVFTLKEMEEATCSFNDDNLLGKGGFGRVYRGTLRSGEVVAIKKMELPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIEQRKMDWPQRLKVALGAAKGLAYLHSSSAVGIPIVHRDFKSTNVLLNINFEAKISDFGLAKLMPEGQEETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELFTGRQAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIESIAMFSNLASRCVRTNSSERPSMAECVKELQMIIHTNSKGLAMVMHSLRMI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1097 425 Pfam Protein kinase domain 127 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1097 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Glsi09g1097 425 FunFam serine/threonine-protein kinase PBS1-like 95 204 - -
Glsi09g1097 425 Gene3D Phosphorylase Kinase; domain 1 96 204 - -
Glsi09g1097 425 FunFam receptor-like serine/threonine-protein kinase NCRK 205 416 - -
Glsi09g1097 425 CDD STKc_IRAK 132 405 - -
Glsi09g1097 425 ProSiteProfiles Protein kinase domain profile. 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1097 425 SUPERFAMILY Protein kinase-like (PK-like) 104 411 IPR011009 -
Glsi09g1097 425 PANTHER OS01G0750732 PROTEIN 86 411 - -
Glsi09g1097 425 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Glsi09g1097 425 Gene3D Transferase(Phosphotransferase) domain 1 205 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1097 Glsi-ChrGlsi09 7650113 7652717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1097 108 404 Receptor kinase-like Gene Family AT3G58690 45.695 8.54e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Glsi09g1097 Pkinase 7.9e-50 CL0016