LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi09g1094	ATGGAGGCTAAGTCACAGATATGGGAAGTGATGCCATTTATAGTGATGGTGATCATGGAAGGATGCACTATAGGACTAACAATTTTCGCCAAAACTACGATAACTAATGGAATGAGCCCGTTTGTGTTTATTGTATATACAAATGCTCTGGCCACTATTATACTCTTCCCTTGTTCCTTTTTATTACACTACAAGGACAGAACGGAGAAGCCACCTTTTACTTTTACTTTGTTTCTGCGATTCTTGTTCCTGGGTTTTACAGGGATAACCATGACTCACAGCTTTTCATTCCTCGGTCTTAGCTACAGTTCTCCAATACTTGCATGTGCAATGGGTCACTTGATCCCATCGTTCAGTTTCCTGCTCTCTGTCATTCTCAGGAAGACAGACTTAGATTTAAGAAGCTCTGCTGTTCAATTCCAAGTAATGGGCACCTTGGTATCTATAATGGGAGCAGTACTAACTGAGTTCTTCAAGGGTCCCCTTATAAGGAACTCTTCTCACCAACTTCGACACATTAGGAAATTTTTCATCTTCTCCTCCACCCCAGAGTTTTGGGTTCTTGGTGGTGTTTTGCTCACTGCAGCTTCTTTCTCATTTGCACTTTGGAACCTTATCCAGAAGGAAACTGTTAAGGTATACCCAGAACCAGTGAAGGTGATCTCCTATTATAGCTTTCTTGGGACAATCCTGAGTGCTATAGTATCGTTGATGGTTGAAAGAGAGTTAAATGCTTGGAAGCTAAAGCATAACATGGAGCTTATTCTCATTGTTTTAACTGCATTATTTGGGGGTGTGATTCGTCCCACTGTCCAAGTCTGGTTCACCGGGCTGAAGGGTCCATTTTATGTGCAGTTGTTCAAGCCCTTTGGCATTGCCTATGCAACCACTTTTGGAGTTGGCTTCTTTCCTAATAGTCTTCATTATGGAAGTGTGATGGGAGCAACCATAATTGGAATGGGGTATTATACAGTGATGTGGGGACAAATCAAAGGAGATGAAGACAAAAGAGGTTGTGACGAAAGCTCAGATTCATTGGACCAGAAGGTCCCGCTATTGCAAGAAAAGATGGAAATGGAAGTGTAG	1086	0.4199	MEAKSQIWEVMPFIVMVIMEGCTIGLTIFAKTTITNGMSPFVFIVYTNALATIILFPCSFLLHYKDRTEKPPFTFTLFLRFLFLGFTGITMTHSFSFLGLSYSSPILACAMGHLIPSFSFLLSVILRKTDLDLRSSAVQFQVMGTLVSIMGAVLTEFFKGPLIRNSSHQLRHIRKFFIFSSTPEFWVLGGVLLTAASFSFALWNLIQKETVKVYPEPVKVISYYSFLGTILSAIVSLMVERELNAWKLKHNMELILIVLTALFGGVIRPTVQVWFTGLKGPFYVQLFKPFGIAYATTFGVGFFPNSLHYGSVMGATIIGMGYYTVMWGQIKGDEDKRGCDESSDSLDQKVPLLQEKMEMEV	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi09g1094	361	Pfam	EamA-like transporter family	14	155	IPR000620	GO:0016020
	Glsi09g1094	361	Pfam	EamA-like transporter family	189	326	IPR000620	GO:0016020
	Glsi09g1094	361	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	48	155	-	-
	Glsi09g1094	361	PANTHER	WAT1-RELATED PROTEIN	9	333	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi09g1094	Glsi-ChrGlsi09	7639086	7640918	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi09g1094	1	361	Nodulin-like Gene Family	AT1G70260	50.133	3.81e-127	368