LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi09g1092	ATGGATTCATTCCCTGGAAAGTGGAAACCAGAACCACTCCGCACAAAAACAAGCAAAGCAGAGAGTGAGAAACAGAGTGCTGAAATGCAGGGCATAGGGGTAACCACGGCAATGGTTGCAGTGCTGTTCTTGCAAGTGGGTTTGAACATTTTAATCAAAGCAGCCATAACCAGAGGGATGAGCAATTTTGTTTATATTTTGTATTCCAACACGTTGTCATATAATGGAATTGGATATAGTTCTCCCACTCTGGCTTCTGCCATGGAGGATCTCGTCCCAGCTTATACCTTCATACTTGCCATTATTTCCAGGATGGAAAAGTTGGATCTGAAACTACGAAGCAGTCAGTCAAAAAGCCTTGGAACTGTGGTCTCCATCACGGGGGCATTAACAGTGACCTTCTACAAAGGCCTATCCATGACTTTTGGGACTTTCCTCTCCCACCAATCACAGTACTGGCTCTTCGGTGGGCTTCTCCTCGCAGCCAGTAGCCTTTGTCTTTCACTCTTGTTCATCGTCCAGACATGGATCATCAAGGAATATCCCGCAGAGCTCATGTCAACGACCATTTCTTGCATTTTTGTGGTCTTTTTATCTGCCATAGTAGCTTGGGTTGCAGAGGAAAATCCAATAGCATGGGTTCTGAGACCTAATGTGGAGTTGGTATCTATATTATATTCGGCAATATTTGTAATATCATTGCGAAATGTGGTGCATGCATGGGCTTGTAGAAAGAAGGGGCCAGTGTATGTTGCTATGTTCAATCCTTTAGGGATAGTCATTGCACTATCTATGGGAGTTGTATTTCTGGGTGACTCTCTGTATCTTGGAAGTATTATTGGAGCAGTCATAATAGCGATTGGGTTTTACGCTGTGATATGGGGACAGGCCCAGGAGGAAAAGAGGGTCAATCAGAGAAATGAAATCTCTGCCTCTGTCTCTGTCTCATCTTCTTCCGTAGCCCCTCTCTTGCAGAACGAATGCATGGGTGGCATTTCCGGTTCATCGGCAACTATGAAGGATTTGGGAGTGATTGGGGTCATGTTGACGGTAGAGTTCTTGGAAGTGACTATCAATACCGTGCTCAGATTTTTGGGGATAGGCTACAGCTCTCCTACTTTGGCCTCCGCCATGTCTGATTTAGCAGTTTTGGCTGTAGCTTTTCGAAGTGTTACCCATATCTGGGTATTAAAGAAGAAGGGGCCTGTCTATGTTTCAATGTTTAAGCCACTCGAAATGGTCATTGCAGCTGTCATGGGGATTACTTTTCTAGGGGACACTCTGTATCTTGGAAGGACAGGAATTAAGGATAAAAGCAGTGGGAGAGAAAGGGAGGATGGGAGGTTGACTTTCAACAGCTTGTAG	1365	0.4484	MDSFPGKWKPEPLRTKTSKAESEKQSAEMQGIGVTTAMVAVLFLQVGLNILIKAAITRGMSNFVYILYSNTLSYNGIGYSSPTLASAMEDLVPAYTFILAIISRMEKLDLKLRSSQSKSLGTVVSITGALTVTFYKGLSMTFGTFLSHQSQYWLFGGLLLAASSLCLSLLFIVQTWIIKEYPAELMSTTISCIFVVFLSAIVAWVAEENPIAWVLRPNVELVSILYSAIFVISLRNVVHAWACRKKGPVYVAMFNPLGIVIALSMGVVFLGDSLYLGSIIGAVIIAIGFYAVIWGQAQEEKRVNQRNEISASVSVSSSSVAPLLQNECMGGISGSSATMKDLGVIGVMLTVEFLEVTINTVLRFLGIGYSSPTLASAMSDLAVLAVAFRSVTHIWVLKKKGPVYVSMFKPLEMVIAAVMGITFLGDTLYLGRTGIKDKSSGREREDGRLTFNSL	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi09g1092	454	MobiDBLite	consensus disorder prediction	1	26	-	-
	Glsi09g1092	454	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	217	297	-	-
	Glsi09g1092	454	PANTHER	WAT1-RELATED PROTEIN	386	430	IPR030184	GO:0016020\|GO:0022857
	Glsi09g1092	454	MobiDBLite	consensus disorder prediction	7	23	-	-
	Glsi09g1092	454	Pfam	EamA-like transporter family	155	293	IPR000620	GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi09g1092	Glsi-ChrGlsi09	7612871	7619360	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi09g1092	393	431	Nodulin-like Gene Family	AT3G28050	56.410	4.13e-09	56.2