Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1079 ATGAAGGCGGCAAAAAATCCCAACTGGAAAGGGCCTATCTGCAATTGGTTTTTTCTCAATGCTTTTGATTTCAGTAGCAATGCTTCTTTTAGATTTCTAAGAGCACTTGTCATGGATCTAGAAGGTGGAATTCATCAAAACTCTGTTAAGAAAGAATCATGGAAGACGGTTCTGACTCTGGCATACCAGAGCCTTGGAGTTGTCTATGGAGATTTAAGCACTTCGCCACTGTACGTGTACAGGAACACGTTTGCTGAAGATATTGGACACACAGAAGCCAACGAAGAGATTTATGGTGTTTTGTCTTTGGTGTTCTGGACTCTCACGTTGGTTCCTTTGATCAAATACGTCTTCATCGTGCTCAAAGCTGACGATAATGGCGAAGGGGGTACATTTGCTCTGTACTCTTTGCTGTGTCGGCATGCCCGGGTCAGCTCAATGCCCAATTGCCAGCTGGCAGACGAGGAGCTCTCGGAGTACAAGAAGGATAGTTTCGTTGGGGCTCCAGAAAGAAGCTTTGCCTCCAGACTGAAGTCCACGTTAGAGAAGCACAAGGTTTTGCAGAGGATTTTGCTGGTTCTGGCTTTGATTGGAACTTGCATGGTGATTGGTGATGGCGTCCTCACACCGGCTCTTTCTGTTTTCTCTGCGGTGTCGGGCCTTGAGCTTTCAATGTCCAAGGAACATCACCGATATGTAGAAGTCCCGGCTGCATGCATCATACTGATAGGCTTGTTTGCCCTTCAACAGTATGGCACACACAGGGTTGGCTTCTTGTTTGCTCCTATAGTAATGACATGGCTTTTCTGCATCAGTGCCATTGGTGTATATAATATAATTCACTTTAATCCTCATGTGTATAAAGCACTCTCTCCTTATTATGTTTTCCAATTTCTAAGGAAAACTCAAAGAGGAGGTTGGATGTCCCTTGGTGGAATTTTGTTATGCATAACAGGATCAGAAGCCATGTTTGCTGATCTCGGGCATTTCTCACAATTATCAATCAAGATTGCTTTCACCTCTGTGGTTTATCCATCATTAGTTCTAGCATACATGGGTCAAGCTGCCTATCTATCTAGACATCATGATGTTACGCATGAGTATCACTTTGGATTTTACGTATCTGTACCAGAGAAATTGAGATGGCCTGTTCTGGTGATAGCCATACTTGCTGCAGTTGTGGGAAGCCAGGCCATAATCACTGGAATTTTCTCAACCATCAAGCAGTGCTCTGCATTAAGTTGCTTCCCAAGAGTTAAAGTCATACACACATCATCGAAAATTCACGGGCAAATATATATCCCTGAGATCAACTGGCTATTGATGCTCTTATGTTTGGCTGTCACCATTGGTTTCAGAGACACAAAGCGCTTGGGTAATGCATCAGGCTTGGCAGTTATCTCAGTGATGCTGGTCACCACCTGTTTGATGTCTCTGGTTATAGTAATATGCTGGCACCGGAGTGTTTTCCTTGCACTCGGTTTTGTTTTTGTATTTGGCACCGTTGAGGCTCTCTTTTTCTCGGCTTCTCTTATCAAGTTCCTAGAAGGAGCATGGGTGCCTATTGCTTTGGCGTTTGTATTTCTGACTGTCATGTATGTTTGGCACTATGGCACCCTCAAAAAGTATGAATTTGATGTCCAAAACAAGGTCTCCATCAACTGGCTACTCAGCCTAGGCCCCAGCATAGGTATTGTACGAGTGCGTGGGATCGGGCTTATACATACCGAGCTAGTATCTGGAATTCCCGCCATTTTCTCCCACTTTGTAACCAACCTTCCAGCCTTCCACCAGGTCGTAGTTTTTCTCTGTATCAAACACGTTCCAGTTCCACACGTCAGACCTGAGGAACGGTTTCTGGTGGGGCGGATAGGTCCACAAGACTTTAGACTCTACCGGTGTATAGTGCGATATGGATATCACGATGTCCACAAAGATGACATTGAGTTTGAGAATGATCTTGTATGCAGCATAGCAGAGTTCATACGGACGGAGGGCGAAGGATTTAATGCTTCAAATGAAGAGGTTGAAAAGGATAACAAAATGACAGTGGTTGGAACATGTTCTACCCACCCCATTTTGAAGAGCGAGGATACATTGGATAATGTAGACTCAGCTGAGATATCAGAACCTAGGGAGATAAAGTCACCCGAGGTGATCCAACCGAAGAAAAGGGTGAGTTTTCTAGTACCAGAAAGCCCAAAGATTGAGAATGGTGCAAGGGAAGAGTTGCAGGAGCTGATGGAAGCAAGGGAATCTGGGGTAGCTTATATTATAGGGCATTCTTATATGAGAGCAAAACCAGGGTCCAGCATGCTGAAGAAATTAGTGATTAATTATGGGTACGAATTCTTAAGGAGGAATAGTAGGGCACACTCCTATGTAGTTAGTGTACCTCATGCATCGTCACTGGAAGTAGGGATGATGTACCAAGTTTGA 2439 0.4432 MKAAKNPNWKGPICNWFFLNAFDFSSNASFRFLRALVMDLEGGIHQNSVKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYRNTFAEDIGHTEANEEIYGVLSLVFWTLTLVPLIKYVFIVLKADDNGEGGTFALYSLLCRHARVSSMPNCQLADEELSEYKKDSFVGAPERSFASRLKSTLEKHKVLQRILLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEHHRYVEVPAACIILIGLFALQQYGTHRVGFLFAPIVMTWLFCISAIGVYNIIHFNPHVYKALSPYYVFQFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSVVYPSLVLAYMGQAAYLSRHHDVTHEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGIFSTIKQCSALSCFPRVKVIHTSSKIHGQIYIPEINWLLMLLCLAVTIGFRDTKRLGNASGLAVISVMLVTTCLMSLVIVICWHRSVFLALGFVFVFGTVEALFFSASLIKFLEGAWVPIALAFVFLTVMYVWHYGTLKKYEFDVQNKVSINWLLSLGPSIGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKHVPVPHVRPEERFLVGRIGPQDFRLYRCIVRYGYHDVHKDDIEFENDLVCSIAEFIRTEGEGFNASNEEVEKDNKMTVVGTCSTHPILKSEDTLDNVDSAEISEPREIKSPEVIQPKKRVSFLVPESPKIENGAREELQELMEARESGVAYIIGHSYMRAKPGSSMLKKLVINYGYEFLRRNSRAHSYVVSVPHASSLEVGMMYQV 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1079 812 Pfam K+ potassium transporter 62 642 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi09g1079 812 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 48 811 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi09g1079 812 NCBIfam potassium uptake protein 60 812 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1079 Glsi-ChrGlsi09 7533004 7538441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1079 38 812 Inorganic Solute Cotransporters AT1G70300 74.492 0.0 1209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0840 05 58793446 58801007 Glsi09g1079 09 7533004 7538441 CCT
Glsi09g1079 09 7533004 7538441 Glsi09g1079 09 7533004 7538441 ECH