Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1078 ATGGAAGCTGATAGGATTGAAGAGAGTAGCGTGAGGTTGTTAAAAAGTAGCAGTAGTGGTGGAAGTAGTGGGTCTAGGTGGGTTGATGGAAGTGAAGTGGAGTGGGAGGCGCTCCCATGTTCTAAGCATCATGAAAACGAGGGTAGAGAAGGATATGGATCAATCAGAAGGAGGCTTGCAAAGAAACCCAAGAGAGTTGATTCATTTGATGTCGAAGCCATGGAGATTGCTGGTAGTCACGACCACCACAACAAGGATCTTTCCCTTTGGCCCACTGTTGCAATGGCATTTCAGACTCTTGGTGTGGTATATGGTGACTTGGGAACAAGTCCTCTATATGTCTTTGCTGATGTCTTCAGCAAGGTTCAAATTGAGTCAGATGTTGACGTATTGGGGGCCTTATCATTAATAATGTACACAATAGCAGTTATTCCATTAGCAAAGTATGTTTTTATAGTCCTCAAGGCAAATGATAATGGAGAAGGAGGAACATTTGCACTGTACTCGCTAATTTGCAGGTATGCAAATGTAAATTTGCTTCCCAATCGTCAGCCAGCTGATGAACATATCTCTAGTTATAAGCTCAAACTGCCCACTCCAGAGCTGGAAAGAGCTTTGAACATAAAGGAGACTTTGGAAAGGAGGTCATCTCTGAAAACTCTTTTGTTGCTATTGGTTCTGCTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTATAAGTGGCCTCCAAGGTGAAATAAGCGGAATTGGTACAAATACTGTGGTTATTATTTCTATTATAGTCCTGGTGGCTTTGTTCAGCATTCAACGGTTTGGTACTGGTAAAGTGGCTTTCATGTTTGCTCCTGTTCTTGCTTTGTGGTTCTTTTCTCTGGGTTCTATTGGAATATACAATATACTTAAGCATGACATTACTGTTCTGAGAGCATTCAATCCAGCTTATATCTATTATTTCTTCAAGAAGAATACCAAAAGTGCATGGTCAGCTCTTGGAGGCTGTGTTCTGTGTATTACAGGTGCTGAAGCAATGTTTGCTGATCTAGGTCATTTTTCTGTACGATCAATACAGATTGCTTTTACTTGTGTGGTATTTCCCTGTCTCCTCGTTGCTTATATGGGCCAAGCTGCTTACTTGATCAAGTACCCTACTTCTTCTTCAAGGATATTCTATGACTCTGTTCCAGATAGTCTCTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCCAGTCAAGCAATGATATCTGCTACATTCTCATGTGTAAAGCAATCTATGGCTTTGGGCTGCTTCCCAAGGCTCAAGATAATTCACACCTCAAAAAAGCTAATGGGTCAAATTTACATCCCTGTAATGAACTTTTTTCTTATGATCATGTGCATAGTTGTCGTTTCCATCTTCCGGAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTAGGTGTCATGATGGTTAGCACTACCTTGGTGACACTTGTAATGCTTCTAATCTGGCAGACCAACTTGTTTTTGGCATGTTGTTTTCCACTTGTATTTGGATCGGTGGAGCTCATTTACATGTCTTCTGTCCTATCAAAAATCTTTGAGGGTGGCTGGCTTCCACTTGTCTTTGCTACCTGCTTCCTCTCTGTGATGTACACGTGGAACTATGGGAGTGTATTGAAGTACCATAGTGAAGTGAGGGAGAAGATCTCTTTGGACTTGATGCTTGACCTTGGCTCCAATCTTGGAACTGTTAGAGTACCTGGAATAGGGTTGCTATATAATGAGCTTGTCCAAGGCATTCCCTCCATTTTTGCTCAGTTCCTGCTGAGCCTCCCTGCTCTCCACTCTACTATAGTTTTTGTTTGCATCAAATATGTCCCAATCCCTGTGGTTCCTCAAGAGGAAAGATTTCTCTTCCGCAGAATTTGCCCAAAGGATTACCATATGTTCCGGTGTGTTGCCAGATATGGTTACAAAGATGTGAGGAAGGAAGATCACCATGCATTTGAACAACTTCTTATTGAAAGTCTTGAGAAATTTTTGAGAAGGGAGGCTCAAGAAACTGCCTTAGAGAGCGGCTTAACTGAGGACATAGATAGTGTCTCGGTGAGTTTGAGGGATTCTGATCCTCCTGGTGATGGTAATGGGGCTGATGATCTGAGGATTCCACTGATGCGTGGTCAAAATTTAGAAGAAAGAGGAACTCCTAGTGCTACCCCGGAAGCTGCATCAGCGTTACCATCTAGTTATATGTCATCAGATGAAGACCCTAGTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAATGAAATCAGGATTCACATATTTGCTTGGACATGGAGATGTGAGGGCAAAGAAGAACTCTTTTTTCCTCAAGAAATTGGTGATAAATTATTTCTATGCATTTCTGAGAAGGAACTGCAGAGGAGGTACTGCAAACATGAGAGTTCCTCACACTGATATCATTCAAGTGGGGATGACATATATGGTCTGA 2523 0.4205 MEADRIEESSVRLLKSSSSGGSSGSRWVDGSEVEWEALPCSKHHENEGREGYGSIRRRLAKKPKRVDSFDVEAMEIAGSHDHHNKDLSLWPTVAMAFQTLGVVYGDLGTSPLYVFADVFSKVQIESDVDVLGALSLIMYTIAVIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQPADEHISSYKLKLPTPELERALNIKETLERRSSLKTLLLLLVLLGTSMIIGDGILTPAISVMSAISGLQGEISGIGTNTVVIISIIVLVALFSIQRFGTGKVAFMFAPVLALWFFSLGSIGIYNILKHDITVLRAFNPAYIYYFFKKNTKSAWSALGGCVLCITGAEAMFADLGHFSVRSIQIAFTCVVFPCLLVAYMGQAAYLIKYPTSSSRIFYDSVPDSLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKLMGQIYIPVMNFFLMIMCIVVVSIFRSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLACCFPLVFGSVELIYMSSVLSKIFEGGWLPLVFATCFLSVMYTWNYGSVLKYHSEVREKISLDLMLDLGSNLGTVRVPGIGLLYNELVQGIPSIFAQFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRICPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREAQETALESGLTEDIDSVSVSLRDSDPPGDGNGADDLRIPLMRGQNLEERGTPSATPEAASALPSSYMSSDEDPSLEYELSALREAMKSGFTYLLGHGDVRAKKNSFFLKKLVINYFYAFLRRNCRGGTANMRVPHTDIIQVGMTYMV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1078 840 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi09g1078 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 86 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi09g1078 840 MobiDBLite consensus disorder prediction 710 764 - -
Glsi09g1078 840 MobiDBLite consensus disorder prediction 12 26 - -
Glsi09g1078 840 MobiDBLite consensus disorder prediction 750 764 - -
Glsi09g1078 840 MobiDBLite consensus disorder prediction 1 28 - -
Glsi09g1078 840 NCBIfam potassium uptake protein 95 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1078 Glsi-ChrGlsi09 7513583 7524559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1078 4 840 Inorganic Solute Cotransporters AT1G60160 75.833 0.0 1266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1078 09 7513583 7524559 Glsi05g0840 05 58793446 58801007 CCT