Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1074 ATGGCCACGCCATGTTGGCATCATCAGTTCATCATCTTTAAAATTGTCGAACGGGAGGTCATGGCTTCTTCGATGAGGATCTCAAGGCTGCTCTCTCGCTCTTTATCTTCTGCTTCCTCTACTTCTTTGTTTTCTCGAGGTGGTAATGGTAACCTGAGTAGAGGGCTGAGTAAATACAGCACTGCTGCTGCTGTTGAAGAACCAATTAAGCCAACGATTCAAATAGATCACACCCAGCTCCTAATCGATGGGAAATTCGTGGATGCTGCTTCTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGGGAAGCAATTGCACATATTGCTGAGGGTGACTCTGAAGATGTGGATCGAGCAGTTGTAGCTGCGCGCAAGGCGTTCGACCAAGGGCCTTGGCCAAGAATGACAGCCTATGAAAGACAAAAAATATTGTTGCGTGCTGCTGACCTGATTGAAAAGCATAATGATGAGATTGCGACCCTCGAGACTTGGGATAATGGGAAGCCATATGCACAAGCTGCTCAAATTGAAGTTCCAATGATGGTTCGTCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCGTGGTTCCCGCTGATGGGCCACATCATGTGCAAGTATTGCACGAACCAATTGGTGTTGCTGGTCAGATCATTCCGTGGAACTTCCCTCTTCTCATGTTCGCGTGGAAGGTTGGGCCTGCATTAGCCTGTGGCAACACTGTTGTTCTGAAAACGGCTGAACAAACGCCATTATCTGCTTTATATGCATCAAAGCTATTCCATGAGGCTGGACTTCCTCCTGGTGTTTTAAATATAGTATCTGGCTTTGGTCCAACTGCCGGTGCTGCTCTTGCTAGTCACATGGATGTTGATAAGCTTGCTTTTACTGGTTCAACTGATACTGGAAAAGTGGTCCTCCAACTGGCGGCAAAAAGTAATCTCAAGCCTGTAACTTTGGAGCTTGGTGGGAAATCCCCCTTCATTGTATGCGAAGATGCTGATGTAGATCAGGCTGTAGAGCTAGCACACTTTGCTTTATTCTTTAATCAGGGACAATGCTGCTGTGCCGGGTCTCGTACATTTGTACATGAACGTGTATATGATGAATTTGTTGAAAAAGCAAAAGCCCGCGCTTTGAATCGATCTGTTGGTGATCCATTCAAGGCGGGGATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTGAGAAGATCCTGAAATATATAAGATCTGGTGTTGAAAGTGGAGCTAACCTTGAAACTGGAGGAGAAAGACATGGAGACAAAGGCTTCTATATTAAGCCAACTGTGTTCACAAATGTTCAGGATGGCATGGCAATTGCGAAGGAAGAGATATTTGGCCCAGTGCAGACCATATTGAAATTCAATGACCTTGATGAGGCGATTCGAAGAGCAAACAATACACGCTATGGCCTAGCAGCCGGGGTGTTTACAAAGAACATAGCCACTGCTAACACTCTGACTCGAGCACTGCGAGCTGGAACAGTATGGATAAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGGCAAGGCAGAGAAAAAGGAGTTTACAGTCTTAAAAACTACTTGCAAGTGAAGGCCGTTGTTACTCCCTTGCACAACCCAGCATGGCTTTGA 1677 0.4556 MATPCWHHQFIIFKIVEREVMASSMRISRLLSRSLSSASSTSLFSRGGNGNLSRGLSKYSTAAAVEEPIKPTIQIDHTQLLIDGKFVDAASGKTFPTLDPRTGEAIAHIAEGDSEDVDRAVVAARKAFDQGPWPRMTAYERQKILLRAADLIEKHNDEIATLETWDNGKPYAQAAQIEVPMMVRLFRYYAGWADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYASKLFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALNRSVGDPFKAGIEQGPQIDSEQFEKILKYIRSGVESGANLETGGERHGDKGFYIKPTVFTNVQDGMAIAKEEIFGPVQTILKFNDLDEAIRRANNTRYGLAAGVFTKNIATANTLTRALRAGTVWINCFDTFDAAIPFGGYKMSGQGREKGVYSLKNYLQVKAVVTPLHNPAWL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1074 558 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 330 519 IPR016163 GO:0016620
Glsi09g1074 558 FunFam Aldehyde dehydrogenase, putative 520 546 - -
Glsi09g1074 558 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 324 331 IPR029510 GO:0016491
Glsi09g1074 558 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 63 548 - -
Glsi09g1074 558 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 82 348 - -
Glsi09g1074 558 Pfam Aldehyde dehydrogenase family 86 548 IPR015590 GO:0016491
Glsi09g1074 558 CDD ALDH_F2BC 75 550 - -
Glsi09g1074 558 FunFam Mitochondrial aldehyde dehydrogenase 2 330 519 - -
Glsi09g1074 558 SUPERFAMILY ALDH-like 74 553 IPR016161 GO:0016491
Glsi09g1074 558 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 92 548 IPR016162 GO:0016491
Glsi09g1074 558 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 352 363 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1074 Glsi-ChrGlsi09 7488970 7492915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1074 23 558 Aldehyde Dehydrogenase Gene Family AT3G48000 75.233 0.0 870
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1074 09 7488970 7492915 Glsi09g1074 09 7488970 7492915 ECH