Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1059 ATGGCTAACAAAACCTCCGACAATGATTCCGAGGATGATTCTTCCCCACCATCAAAAGTGCCATCCCCTTCTAAGTCGGACGATGATTGGGAGAAGGAATCTTCGCCGTCACCAAAAAGTTCGCCCACGGAAACGGCTGTAGCTCCATCACCGGAGTCTTTATCATCCTCCGATGATTCGGATTCTCCTCAAAGTTCTTTATCGAAGACATCACCACCACCAACAGAGTCTCCCGCTTCTTCTCCAAGTTCACCGCCGTCTAAAGGTTCAGCTCCCGAGAAATCATCTCCGTCGCCGTCGCCGTCGCAGCCACAGCCACCGCCCCTGCCCCCGCCACCGCCAACCTCATCACCCCCGCCCTCTTCGCCACCGCCATCACCCCCACCCACTTCGCCACCGCCATCGCCAGCTTCGGGTAATGGTGATATTCCCTCTCCTAGTCCTAAACAGTCGCCACCAACAAAATCTCAAGCCTCGTCTCCATCTGAGAACTCTTCTCCAACTCAACCTTCATCTGCACCCTCCAATAATTCATCCGCGCCCGGTTCTGGGACCTTTGGCAATGTACCACCACCTTCTTTCCTTGTTACCCCTCCAGGTGGCAGTTTCCCACTGAAGACATTCAGCCCTCCGCCGCCACTGACAACGGTGGTCCCGACTACTGATTCTAGGTCAAACCACCTTCCATCACCGCACTCACCAGGCATTTCCGTTGGCTCCCATGCAAATACAAGGAGTTCTTCTTATGGCTCCTTGCCGTCAACGTCAGGAGATGGCGGTGACAATTCAGGAAAGTACGTTGGTTATGCATTCGCCGGAGTTTTCATGGTTGCCTTTATTGCTATAGTTCTTGTGGTTGCGTTAAAGAGGAGTAAAAAACGAGGGGGCGTCTATGATACAACTTATATGCCGCCGCCCCCTAATAAATTTCCTATGAAAGCAGATGGTCATTATTACGTATACGGACAGCAGCCTGGTGTTGCCAATTGTCTACAAGATGGAAACTATGGAAAGGGGAGTCAAAGAGGAACTGTGCACCCTTTAGGAACTCCAGAGTCAGCACAGCCGAAGATTGCTCAAATAGCATTCGGCTATGAAAATATTAAGGAGATAACAAACGGGTTTGATAGTCAAAACGTTATAGGGGAGGGGGGTTTTGGATGCGTTTACAAGGGTTGGCTGACAAATGGAAGAGCAGTAGCAGTCAAACAGCTGAAGCCTGGCAGCGGGCAAGGTGATCGGGAATTTAGGGCGGAAGTGGAGATTATCAGCCGTGTTCATCATCGACATTTGGTATCATTAGTTGGTTATTGCATATCTGGGCAGCAAAAAGTGCTTATATATGAGTTTGTTCCCAATGGAACTCTCAATCATCACTTGCATGGAAGTGGAATGCCGGTGTTGGATTGGACCAAGAGGTTGAAGATAGCAATCGGTGCTGCAAAAGGCCTGGCATATTTGCATGAAGACTATAGTGGAAAACTTCATGAGTTGGCCAAGCTTTTAAGGTACATGGCACCAGAGTATGCAACAAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCCTTCGGAGTTGTCCTCCTTGAGCTTGTGACTGGAAGGAAGCCTGTTGATCAAACTCAGCCTGTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCTCTTCTCATTAAAGCAATTGAGACTGGTGACTTCAATGAACTAATAGACCCAAGGCTTGAGCGTCATTATGTGGGGAGTGAAATGTGTAGAATGATTGAAGCAGCAGCAGCATGTATACGCCATTCTGCTCCAAAACGGCCCCGTATGCTTCAGATCGTAAGAGCCTTAGATAGTGACGGTGAACTACATGACCTATCTAATGGGGTGAAATATGGTCAGAGCACAGTTTATGATTCTGGGCAGTATGATGAAGAAATTATGAGATTCATGATGAGGACCGTTAGTTGTGGCAATTCCGAATTTGATATGTATAGTGGAGAATTCAGTTCAAGAGAGATGTCTGGAACCCGACATGCATAG 2025 0.483 MANKTSDNDSEDDSSPPSKVPSPSKSDDDWEKESSPSPKSSPTETAVAPSPESLSSSDDSDSPQSSLSKTSPPPTESPASSPSSPPSKGSAPEKSSPSPSPSQPQPPPLPPPPPTSSPPPSSPPPSPPPTSPPPSPASGNGDIPSPSPKQSPPTKSQASSPSENSSPTQPSSAPSNNSSAPGSGTFGNVPPPSFLVTPPGGSFPLKTFSPPPPLTTVVPTTDSRSNHLPSPHSPGISVGSHANTRSSSYGSLPSTSGDGGDNSGKYVGYAFAGVFMVAFIAIVLVVALKRSKKRGGVYDTTYMPPPPNKFPMKADGHYYVYGQQPGVANCLQDGNYGKGSQRGTVHPLGTPESAQPKIAQIAFGYENIKEITNGFDSQNVIGEGGFGCVYKGWLTNGRAVAVKQLKPGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISGQQKVLIYEFVPNGTLNHHLHGSGMPVLDWTKRLKIAIGAAKGLAYLHEDYSGKLHELAKLLRYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPVGDESLVEWARPLLIKAIETGDFNELIDPRLERHYVGSEMCRMIEAAAACIRHSAPKRPRMLQIVRALDSDGELHDLSNGVKYGQSTVYDSGQYDEEIMRFMMRTVSCGNSEFDMYSGEFSSREMSGTRHA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1059 674 MobiDBLite consensus disorder prediction 192 217 - -
Glsi09g1059 674 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 275 495 IPR047117 -
Glsi09g1059 674 MobiDBLite consensus disorder prediction 36 74 - -
Glsi09g1059 674 Gene3D Phosphorylase Kinase; domain 1 346 450 - -
Glsi09g1059 674 Pfam Protein tyrosine and serine/threonine kinase 501 610 IPR001245 GO:0004672|GO:0006468
Glsi09g1059 674 Pfam Protein tyrosine and serine/threonine kinase 378 489 IPR001245 GO:0004672|GO:0006468
Glsi09g1059 674 MobiDBLite consensus disorder prediction 1 260 - -
Glsi09g1059 674 Gene3D Transferase(Phosphotransferase) domain 1 495 624 - -
Glsi09g1059 674 SUPERFAMILY Protein kinase-like (PK-like) 355 611 IPR011009 -
Glsi09g1059 674 MobiDBLite consensus disorder prediction 152 186 - -
Glsi09g1059 674 ProSiteProfiles Protein kinase domain profile. 375 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1059 674 PRINTS Proline rich extensin signature 33 54 - -
Glsi09g1059 674 PRINTS Proline rich extensin signature 67 83 - -
Glsi09g1059 674 PRINTS Proline rich extensin signature 89 106 - -
Glsi09g1059 674 PRINTS Proline rich extensin signature 14 26 - -
Glsi09g1059 674 PRINTS Proline rich extensin signature 107 132 - -
Glsi09g1059 674 MobiDBLite consensus disorder prediction 82 96 - -
Glsi09g1059 674 FunFam Proline-rich receptor-like protein kinase PERK8 349 450 - -
Glsi09g1059 674 MobiDBLite consensus disorder prediction 218 260 - -
Glsi09g1059 674 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Glsi09g1059 674 MobiDBLite consensus disorder prediction 97 151 - -
Glsi09g1059 674 Gene3D Transferase(Phosphotransferase) domain 1 452 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1059 Glsi-ChrGlsi09 7387550 7392126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1059 247 667 Trihelix Transcription Factor Family AT1G70460 54.219 1.79e-163 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Glsi09g1059 PK_Tyr_Ser-Thr 6.3e-09 CL0016