Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1032 ATGGATATTGTTAGTTCTATTTTCTGTCTTCTGGGTTTGCTGCTTCCGGCGTTGATGGAGATATCTTCTGCTGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATAAAAAATGACCTGTTTGATCCCCACAATGTCCTGGAGAATTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTTCTCCAGATGGCGACGTTTCTGCTTTGGGATTGCCCAGTCAGAACTTGTCTGGCAAGCTATCTCCTGGGATTGGAAACCTGACTAACTTGCAATCTGTGTTGCTTCAGAACAATGCCATTTCTGGTCCAATTCCTGCTGCTATAGGAAAGCTGAAGAAGCTTCAGACACTTGATCTTTCCAATAATGCATTTAGTAGTGAGATACCTAGTTCTTTGGGGAGCCTCAAGAACCTGAATTATTTGCGGCTGAATAATAACAGCCTTTCTGGAGCCTGCCCTCAGACTCTTGGCAACATTGAAGGTCTAACCCTTGTGGATCTCTCTTACAACAATCTGAGTGGTTCCTTGCCAAGAATATCAGCAAGAACATTCAAGATTGCGGGTAACCCTTTAATTTGTGGTCCCAATGCTAACTGTTCTAATGTTCTGCCAGAGCCACTTCCCTTCCCATCAGATTCTCGAAGAGCCCAATCAGCCTCTGGAACGAAAAGTCATCATGTGGCAGTTGCTCTTGGAGCAAGTTTTGGAGCTGCTGTTTTCATTATTATTATTGCCTTGTTTGTTGTTTGGCTGCGGTATAGACATAACAAACAGATATTCTTTGACGTTAACGAGCAATATGACCCAGAGGTGCGCCTTGGTCATTTGAGGAGGTATACATTCAAAGAGCTTCGAGCTGCAACGGATCATTTCAATTCAAAGAATATTCTAGGAAGGGGTGGCTTTGGAATAGTCTACAAGGGGCGCTTCAATGATGGCTCTGTTGTGGCAGTTAAAAGGTTGAAGGACTATAACGCTGGCGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACGATAAGTTTGGCTGTCCACCGGAATCTTCTGAGACTTTGTGGGTTTTGCAGTACTCAGAATGAAAGGCTCCTCGTTTATCCATACATGCCCAATGGCAGTGTAGCCTCTCGATTAAAAGATAATATTCATGGTCGACCAGCCTTAGATTGGGTGAGGAGGAAGAGAATAGCATTGGGTACAGGGAGAGGGTTGGTTTATTTGCACGAGCAATGTGACCCTAAAATCATTCACCGTGATGTCAAAGCGGCCAACATATTACTGGATGAAGACTTTGAAGCAGTTGTTGGTGATTTTGGTCTGGCAAAGCTTCTGGATCACAGAGATTCTCATGTGACTACAGCCGTGCGTGGCACTGTTGGTCATATTGCTCCAGAATACTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTTTTTGGGTTTGGAATCTTGCTGCTTGAGCTGGTCACGGGTCATAAGGCTTTGGATTTTGGGCGAGCGGCGAATCAGAAAGGTGTAATGCTTGATTGGGTGAAGAAGCTCCATCAGGAAGGAAGATTAAGTCAAATGGTTGATAAAGATTTAAAGGGAAATTTTGATGCAGTTGAACTGGAAGAAATGGTTCAGGTTGCACTGTTATGTACACAGTTTAATCCTTCCCACCGTCCGAAGATGTCAGAAGTATTGAAGATGTTGGAAGGTGATGGGTTATCAGAGAGATGGGAAGCCTCACAGAAGATTGAGACGCCAAGATTTAGGTCATGTGAAAACCCTCCTCAAAGATATTCAGATCTTATAGAAGAATCCTCGCTCATAGTAGAAGCTATGGAGCTTTCTGGCCCTAGGTGA 1875 0.4389 MDIVSSIFCLLGLLLPALMEISSAALSPSGINYEVVALMAIKNDLFDPHNVLENWDINSVDPCSWRMITCSPDGDVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGPIPAAIGKLKKLQTLDLSNNAFSSEIPSSLGSLKNLNYLRLNNNSLSGACPQTLGNIEGLTLVDLSYNNLSGSLPRISARTFKIAGNPLICGPNANCSNVLPEPLPFPSDSRRAQSASGTKSHHVAVALGASFGAAVFIIIIALFVVWLRYRHNKQIFFDVNEQYDPEVRLGHLRRYTFKELRAATDHFNSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMPNGSVASRLKDNIHGRPALDWVRRKRIALGTGRGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVTGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDLKGNFDAVELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLSERWEASQKIETPRFRSCENPPQRYSDLIEESSLIVEAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1032 624 Gene3D Ribonuclease Inhibitor 31 211 IPR032675 -
Glsi09g1032 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 585 - -
Glsi09g1032 624 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Glsi09g1032 624 SUPERFAMILY L domain-like 32 199 - -
Glsi09g1032 624 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 211 - -
Glsi09g1032 624 Pfam Protein kinase domain 302 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1032 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Glsi09g1032 624 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Glsi09g1032 624 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Glsi09g1032 624 FunFam Somatic embryogenesis receptor-like kinase 1 378 594 - -
Glsi09g1032 624 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Glsi09g1032 624 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
Glsi09g1032 624 SMART serkin_6 301 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1032 624 ProSiteProfiles Protein kinase domain profile. 301 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1032 624 FunFam Somatic embryogenesis receptor kinase 1 270 377 - -
Glsi09g1032 624 Gene3D Transferase(Phosphotransferase) domain 1 378 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1032 Glsi-ChrGlsi09 7242896 7247163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1032 67 624 Receptor kinase-like Gene Family AT1G60800 76.098 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi09g1032 Pkinase 2.2e-43 CL0016