Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1028 ATGAAGGACCGTGTAACACCCTGTCGAGCTCTGTTTTTCAACGATAAACTTTTCGCGTTGACTCCCTGCATTAGCTTTAAGTCCTTCTTCTTTACTTGGAGCAAATTAAAATCTCATCTTCCTAATTTGGAATTTGAGATCTCAAAGGGAAATTCAATTCAGTTCTGGCCTTCTGGGTTTCAATGGAGAGCAGAGGACAGCTACCAAAAAGTCAGTGCCAACTGCCGACGGTGGTTCTTGTCCTGCGTTCACATACTAGCTGTTTTTCTACCAGCAGCTCCTATTTTTGTCTTGGAGTGGCCTTTCTTTTCAGGGAATGAAAACGACAATGTTACGATCTATACTAAAAGATATGAATGCCCTATTGTTTGGTATGGTGTTGATTCACCAACATTCTTCCTCAGTAAAAAATGTAATCATAAACCCAGAATGATCTTGTATCTGATAAAGCCTAAACCACACACAAAAAGTTCTAAACCCTCCTTTCGCTGCAGTTTCTTCTTAAGTTGCCCATCGATCAGTACCAGAGAAAGTGATTCAGATCGTTTCATCCCAAAGATGAAGAAAGCAATCCCCCTTGTCTCTTCTCAATGCCTCGTTTTCCTTCTAATCAAGTCACTATTACTATCAGAAACAGTAGTGGGGGAACCAAGAGCCAAGAAGGTCCAAATAATATGTGGCCATCAAAAAGAGCACAATACCACTATTTTTGTTCGAAATTTCGTTGCAACTATGGAGAAGATCAGTGAACAGATGCGCACTTCTGGCTATGGCACAGCAGTTATAGGTACAGGACCTGATACCAACTATGGCCTGGCTCAGTGTTATGGAGACCTTTCGTTACTTGACTGTGTATTATGTTACGCCGAGGCTCGAACAGTTCTTCCCCAGTGCTTCCCTAACAATGGTGGTCGCATCTACCTTGATGGTTGCTTCATGAGGGCTGAGAACTATAGCTTCTTCAACGAGTATAGAGGAGCAGGAGACAGGGCTGTGTGCGGGAACACAACCAAGAAGAACTCAGGTTTTGAAGCAGCAGCAAAGCAAGCAGTTTTGAGCGCAGTTCAAGCTGCACCCAACAATAAAGGCTATGCCAGGGAGAAGGTTGCTGTGTCAGGAACAGTAAACGAGTCAGCTTATGTTCTGGCTGATTGCTGGAGGAGTTTGAACACAACCTCTTGCAAAGCATGTCTTGAGAATGCATCTTCTTCAATATTAGGATGCTTGCCCTGGTCAGAAGGGCGAGCACTGAACACTGGCTGCTTCATGAGGTATTCAGACACAAATTTTCTGAACAAGGAACTAGAAAAAGGAAGTTCAGTAGGTAATATAGTAGTGCTAGTAGTTGCAGTTGTCAGTTCAGTGATCGTTTTGGCTGTTGCCCTAGCTATTGGAGTATATGTCTGGAAACAGAGATACATTCAAAAGAAACGAAGAGGTTCAAATGATGCCGAAAAGTTAGCAAAGACCCTTCACCACAATAGCTTAAACTTCAAGTACTCTGCACTGGAGAAGGCTACTGGATCTTTTGATGACACAAACAAGCTCGGACAAGGAGGATTTGGAACAGTTTATAAAGGAGTTCTGCCTGATGGAAGAGAGATTGCTGTCAAAAGGTTATATTTTAACAACAGACAAAGAGCAGCAGATTTCTACAACGAAGTCAACATAATCAGTAGTGTGGAACACAAGAATCTAGTCAGATTGTTAGGATGCAGTTGTTCAGGCCCTGAAAGCCTGCTTGTATATGAATTTCTGCCTAACAGGAGTCTTGATCGCTTCATTTTTGATAAAGGCAGGGGCAGGGAACTGAACTGGGATAAGAGATATGAAATTATCATCGGGACAGCTGAAGGATTAGTCTACCTGCATGAGAACTCCAAGATTAGGATAATTCATAGAGATATAAAAGCCAGCAATATCTTATTGGATACAAGGCTTCGCGCTAAAATTGCAGATTTTGGTTTGGCTAGGTCCTTTCAAGAAGACGAGAGCCACATCAGTACGGCTATTGCAGGAACTTTGGGGTATATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAGAAGGCGGATGTATATAGTTTTGGGGTGCTACTGCTAGAAATAGTTACTGGGAGACAGAACAACAGGAGCAAATCCTCAGAATATTCAGACAGCCTAGTTACAGTGACATGGAAGCATTTCCAGTCCGGGACTGCAGAACAGCTATTTGATCCAAATCTAATGTCGCAAGAAAACCACAATAGCAATGTTATGGATGCAATTTTAAGAGTGGTGCACATAGGACTTCTATGCACCCAAGAGATCCCTTCATTACGACCAACTATGTCAAAGGCATTACAGATGATAACTAAGAAGGAAGAGCACCTTCCGGCTCCCACTAATCCACCCTTCGTAGATGAAAGTACCATGGAACTCCAAGACGCATGTGAAGACCCATTTTACCCTGTCAATGCAGCAGCAGACTCAATGGCTACTATGTCCCATAGCTCTTTTTATCCCAGGTGA 2514 0.4284 MKDRVTPCRALFFNDKLFALTPCISFKSFFFTWSKLKSHLPNLEFEISKGNSIQFWPSGFQWRAEDSYQKVSANCRRWFLSCVHILAVFLPAAPIFVLEWPFFSGNENDNVTIYTKRYECPIVWYGVDSPTFFLSKKCNHKPRMILYLIKPKPHTKSSKPSFRCSFFLSCPSISTRESDSDRFIPKMKKAIPLVSSQCLVFLLIKSLLLSETVVGEPRAKKVQIICGHQKEHNTTIFVRNFVATMEKISEQMRTSGYGTAVIGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPNNGGRIYLDGCFMRAENYSFFNEYRGAGDRAVCGNTTKKNSGFEAAAKQAVLSAVQAAPNNKGYAREKVAVSGTVNESAYVLADCWRSLNTTSCKACLENASSSILGCLPWSEGRALNTGCFMRYSDTNFLNKELEKGSSVGNIVVLVVAVVSSVIVLAVALAIGVYVWKQRYIQKKRRGSNDAEKLAKTLHHNSLNFKYSALEKATGSFDDTNKLGQGGFGTVYKGVLPDGREIAVKRLYFNNRQRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNRSLDRFIFDKGRGRELNWDKRYEIIIGTAEGLVYLHENSKIRIIHRDIKASNILLDTRLRAKIADFGLARSFQEDESHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKSSEYSDSLVTVTWKHFQSGTAEQLFDPNLMSQENHNSNVMDAILRVVHIGLLCTQEIPSLRPTMSKALQMITKKEEHLPAPTNPPFVDESTMELQDACEDPFYPVNAAADSMATMSHSSFYPR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1028 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Glsi09g1028 837 FunFam Cysteine-rich receptor-like protein kinase 2 219 320 - -
Glsi09g1028 837 Gene3D Transferase(Phosphotransferase) domain 1 586 796 - -
Glsi09g1028 837 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Glsi09g1028 837 FunFam Putative DUF26-domain receptor-like protein kinase family protein 478 585 - -
Glsi09g1028 837 ProSiteProfiles Gnk2-homologous domain profile. 325 430 IPR002902 -
Glsi09g1028 837 FunFam Cysteine-rich receptor-like protein kinase 2 586 793 - -
Glsi09g1028 837 SUPERFAMILY Protein kinase-like (PK-like) 494 808 IPR011009 -
Glsi09g1028 837 ProSiteProfiles Gnk2-homologous domain profile. 219 320 IPR002902 -
Glsi09g1028 837 Pfam Protein tyrosine and serine/threonine kinase 514 782 IPR001245 GO:0004672|GO:0006468
Glsi09g1028 837 Gene3D Phosphorylase Kinase; domain 1 470 585 - -
Glsi09g1028 837 ProSiteProfiles Protein kinase domain profile. 510 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1028 837 CDD STKc_IRAK 516 787 - -
Glsi09g1028 837 SMART serkin_6 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1028 837 Pfam Salt stress response/antifungal 333 427 IPR002902 -
Glsi09g1028 837 Pfam Salt stress response/antifungal 230 318 IPR002902 -
Glsi09g1028 837 FunFam Cysteine-rich receptor-like protein kinase 3 329 430 - -
Glsi09g1028 837 Gene3D - 219 320 IPR038408 -
Glsi09g1028 837 Gene3D - 330 430 IPR038408 -
Glsi09g1028 837 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 270 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1028 Glsi-ChrGlsi09 7204373 7208686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1028 198 837 Receptor kinase-like Gene Family AT1G70520 67.134 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi09g1028 PK_Tyr_Ser-Thr 2.1e-46 CL0016