Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1025 ATGGATGTTCCGGGTTTTGCCATTGAATCTCAGCAACCAAAGTTCGCTCTTCCTGTGGATTCTGAGCACAAGGCCACTGAATTTAGATTATTCTCAGTGGCCAAGCCCCACATGCGGGCATTCCATCTATCTTGGATTTCCTTCTTATCATGCTTTGTGTCTAGTTTTGCTGCACCTCCTCTCATTCCCATCATCCGTGATAACCTCAACCTTACAGCCACTGACATCGGAAATGCGGGGGTTGCATCAGTTTCGGGTGCAGTTTTTGCTAGGATTGTGATGGGGACTGCCTGTGATTTATTTGGACCCCGTCTTGCCTCTGCCTCTATCATCCTCCTCACAGCTCCAGCAGTCTACTTCACTTCCATTATCTCATCTGCTACCTCCTTCCTCCTCGTACGGTTTTTCACAGGTTTCTCCTTAGCCACCTTTGTCTCAACCCAATTCTGGATGAGCTCTATGTTTTCTGCTCCAGTAGTTGGTTCAGCCAATGGAGTTGCAGCTGGATGGGGCAACCTTGGAGGAGGAGCCACACAACTCCTTATGCCTCTTGTATTTTCCGTAATCCGTGATATTGGTGCTGTCAAATTCACAGCATGGCGAATTGCATTTTTCATTCCTGCACTGTTTCAAACGCTAACAGCATTCGCCATATTTATATTTGGCCAGGATTTGCCAGATGGGAACTTCCATAGCTTGAAGAAATCAGGGGAAAAATCAAAAGATGACTTCTCAAAAGTTCTGTTTTATGGGATTACAAATTACAGGGGGTGGATTCTGGCGTTGACTTATGGATATTGCTTTGGGGTAGAGCTGACAGTGGACAATATCATAGCCGAATACTTCTATGATAGATTTGATCTAAAACTCCACACAGCAGGAATAATTGCTGCAAGCTTTGGATTAGCTAATGTTGTTTCTCGACCTGCAGGGGGCTATATATCAGATGTAATGGCAAAGAGGTTTGGAATGAGGGGTAGGCTTTGGGCCTTATGGCTGTGCCAAACCTTGGGAGGTGTATTCTGTATAATCCTCGGCCTGGTCGGATCTCTAAGTGTATCTATCATTGTCATGATCATATTCTCTTTGTTTGTTCAAGCTGCCTGTGGGCTCACATTTGGGGTGGTTCCTTTTGTCTCAAGAAGGTCATTGGGAGTCATATCTGGAATGACAGGAGGTGGAGGAAATGTGGGTGCTGTTTTGACCCAACTAATTTTCTTCAAAGGTTCCACATTTTCAAAGGAAAGAGGGATAACCCTGATGGGTGTCATGATCATAATCTGCACCCTTCCATTAACTTTAATCTACTTTCCACAATGGGGTGGGATGTTTTGCGGTCCATCGTCTAAAAAGGTGGCGGAAGAAGACTACTACTTGTCCGAATGGAACTCAAAGGAGCAGGAGAAAGGCTCCCATCATGCAAGCTTGAAATTTGCTGATAACAGCAAAAGTGAAAGAGGCAGAAGAGTTCAGTCTTCAACCCGGCCTTCCGAAGAAGCCACGCCACCGTGTGCTTGA 1518 0.4545 MDVPGFAIESQQPKFALPVDSEHKATEFRLFSVAKPHMRAFHLSWISFLSCFVSSFAAPPLIPIIRDNLNLTATDIGNAGVASVSGAVFARIVMGTACDLFGPRLASASIILLTAPAVYFTSIISSATSFLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGVAAGWGNLGGGATQLLMPLVFSVIRDIGAVKFTAWRIAFFIPALFQTLTAFAIFIFGQDLPDGNFHSLKKSGEKSKDDFSKVLFYGITNYRGWILALTYGYCFGVELTVDNIIAEYFYDRFDLKLHTAGIIAASFGLANVVSRPAGGYISDVMAKRFGMRGRLWALWLCQTLGGVFCIILGLVGSLSVSIIVMIIFSLFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFKGSTFSKERGITLMGVMIIICTLPLTLIYFPQWGGMFCGPSSKKVAEEDYYLSEWNSKEQEKGSHHASLKFADNSKSERGRRVQSSTRPSEEATPPCA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1025 505 Gene3D MFS general substrate transporter like domains 241 441 IPR036259 -
Glsi09g1025 505 Pfam Major Facilitator Superfamily 46 401 IPR011701 GO:0022857|GO:0055085
Glsi09g1025 505 SUPERFAMILY MFS general substrate transporter 31 437 IPR036259 -
Glsi09g1025 505 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 434 IPR020846 GO:0022857
Glsi09g1025 505 MobiDBLite consensus disorder prediction 465 505 - -
Glsi09g1025 505 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Glsi09g1025 505 Gene3D MFS general substrate transporter like domains 32 230 IPR036259 -
Glsi09g1025 505 MobiDBLite consensus disorder prediction 465 493 - -
Glsi09g1025 505 FunFam High affinity nitrate transporter 2.5 33 229 - -
Glsi09g1025 505 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 489 IPR044772 GO:0015112
Glsi09g1025 505 FunFam Nitrate transporter 2.1 241 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1025 Glsi-ChrGlsi09 7190586 7192705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1025 14 497 Inorganic Solute Cotransporters AT1G12940 76.446 0.0 775