Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1019 ATGAATTTCGCTAAGATTATCAGTTCTACAGAGTTACTGCTGCTAAAAACTTTGCAGACAGCAGCGAGAAAGGATAACCTAAGCAAACGAACACTACAAAACAGAATAGTTATGAAAGACGAAGGTCAACTAGCACCAGACGTTGACATTGCAAATTTTGATATAGAAGAAAGTTTCATGACCACCACCACAACTATGGCTTCCCTTGATCTCCTTCCTTCTCTTCTTCTCCCTCTGCTGGCAACTTTACTTGCTAGAGTATTTTCCCTGGAAGTTTTCATTGAAACACCTAATATGGTCCCTTTTAAATGCTCTGCAAAAGTCAACTTATGCAATGCGTCACTCTACCACATAAACCACGATCTTAAGATAGATGAAATAGCCTCTCTTTACTCTGTTAATTCGTCCCAAATCGAACCTATGATGCGCGGTACCAACCAAGATTACCTCATAACAGTACCTTGTTCTTGCAAAGGCACCGGTGACCTTAGTGGATATTTCTTTGATACAACCTACAAAGTGAAGCAAAATGAGACATTTATGGATATTTCAAACCTGATTTACAGTGGACAAGCCTGGCCTGTTAAGGATGATTTGATCCCAGATGAGAACTTAACAATACATCTTCCTTGTGGGTGTTCAGAAAGTGACTCTCAAATTGTCGTGACCTACACAGTCCAGCAGAATGAAACGGCAACAGCGATTGCTAATATGCTATCGGCTACTCTCACTGGCATGCAGAACATGAACGAAAATCTAGCTAAGAACCCCTCATTCATAGATGTGGGTTGGGTGCTATATGTTCCAAAGGAGTTGAAAGGGGTTCCATCTTCAAACGGAGGTGGGAACAAAATCAAGCATGCTGTTATCATCGGAATCTTAGGAGGAGTGACGGTACTTTCTATCATTACAGTGATCATTCTCATTTTCAGTAGAAATAGAACCAAAAAGGCCACCAAAAAAGATCGAAAAATTGCGTCTAAAAGATCAACGTCCAATAGAACTCTTTCTTCAAAGAACCATTACCTTCGTAAAGGAAATGTAGAAGATGCAACACCATTTGAATCAGAAAGAGCAGTAATTTTTGATCTCGAGGAGATTGAAGAGGCTACAAATAACTTTGATGAAAGTCGAATAATAGGGGCCGGCGGATATGGGAGTGTGTATTTTGGAATCCTAGGGAAGAAGGTGGAGCTGTTGGGATATGCCAGTGGAGAAGATGACCTCTATTTGGTGTATGAGTATGTTTCAAATGGATCTCTCGGTGAACATATTCATGATCCATTACTAAAAGGTACATTGGATTCAAGATTTCATAGACCATTCTCTGAGAGTCTGAATTTCAAAATGCTAACTGCTAGTTCAGGTCATCTACCTCTTTCTTGGAATGCTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCTCGATATGTGCACCGTGATATAAAGACAAGCAATATTCTCCTCGATGAGAAGCTCAGAGCCAGGGTAGCAGATTTTGGACTTGCAAAGCTAGTAGAACGAACTAGTGATGAAGATTTTATAGCAACAAGGCTTGTTGGAACACCGGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAGGTGACCTCCAAAACTGATGTATTTGCATTTGGAGTGGTTCTATCAGAGCTGATAACAGGGAAACGTGCCCTATTTCGTGACAGCCAAGAAGGCAACAAAATGAAATCACTTATCACAGTTATTCAAAAAGTATTCCAAGATGATGACCCAGAGAGTGCTTTGGAGGCTGTCATAGATAAAAATCTTCGAGATAGCTATCCTATGGAGGATATCTACAAGATGGCAGAAATAGCGGAGCAGTGCATGAGTGAAGAACCAATGGACAGGCCTGAAATAAGGGAGATCGTGGGGATATTGTCACAGCTTGTGATGTCCTCCATAGAGTGGGAAGCATCACTTGGGGGAAACAGCCAGGTTGATTGCGCTTTGCTTTCTACCCGTACAAATATTCCGCCACTACTCAGCTCCATTGTAACATCTGAGAAGCTCAGATCAAACAAGAAACTTGCGATTTCACACCCCGTTACTGCAGAAACGCTTGCACAAACCTTTAAAATGGTTCGGCCACTAACATGGCGGGCTAAGCCCTAG 2166 0.4164 MNFAKIISSTELLLLKTLQTAARKDNLSKRTLQNRIVMKDEGQLAPDVDIANFDIEESFMTTTTTMASLDLLPSLLLPLLATLLARVFSLEVFIETPNMVPFKCSAKVNLCNASLYHINHDLKIDEIASLYSVNSSQIEPMMRGTNQDYLITVPCSCKGTGDLSGYFFDTTYKVKQNETFMDISNLIYSGQAWPVKDDLIPDENLTIHLPCGCSESDSQIVVTYTVQQNETATAIANMLSATLTGMQNMNENLAKNPSFIDVGWVLYVPKELKGVPSSNGGGNKIKHAVIIGILGGVTVLSIITVIILIFSRNRTKKATKKDRKIASKRSTSNRTLSSKNHYLRKGNVEDATPFESERAVIFDLEEIEEATNNFDESRIIGAGGYGSVYFGILGKKVELLGYASGEDDLYLVYEYVSNGSLGEHIHDPLLKGTLDSRFHRPFSESLNFKMLTASSGHLPLSWNARAQIALDAAKGLEYIHDYTKARYVHRDIKTSNILLDEKLRARVADFGLAKLVERTSDEDFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLSELITGKRALFRDSQEGNKMKSLITVIQKVFQDDDPESALEAVIDKNLRDSYPMEDIYKMAEIAEQCMSEEPMDRPEIREIVGILSQLVMSSIEWEASLGGNSQVDCALLSTRTNIPPLLSSIVTSEKLRSNKKLAISHPVTAETLAQTFKMVRPLTWRAKP 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1019 721 Gene3D LysM domain 215 274 IPR036779 -
Glsi09g1019 721 FunFam PTI1-like tyrosine-protein kinase 3 416 658 - -
Glsi09g1019 721 ProSiteProfiles Protein kinase domain profile. 283 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1019 721 Pfam LysM domain 224 269 IPR018392 -
Glsi09g1019 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Glsi09g1019 721 SUPERFAMILY LysM domain 222 269 IPR036779 -
Glsi09g1019 721 Gene3D Phosphorylase Kinase; domain 1 354 397 - -
Glsi09g1019 721 Pfam Protein kinase domain 397 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1019 721 SMART serkin_6 374 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1019 721 ProSiteProfiles LysM domain profile. 222 268 IPR018392 -
Glsi09g1019 721 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 397 664 IPR044812 GO:0019199|GO:0045087
Glsi09g1019 721 SUPERFAMILY Protein kinase-like (PK-like) 353 643 IPR011009 -
Glsi09g1019 721 MobiDBLite consensus disorder prediction 320 339 - -
Glsi09g1019 721 Gene3D Transferase(Phosphotransferase) domain 1 433 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1019 Glsi-ChrGlsi09 7108269 7115052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1019 354 672 Receptor kinase-like Gene Family AT1G51940 42.817 3.09e-88 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi09g1019 Pkinase 8e-34 CL0016