Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1002 ATGCCACGACAAGCGCTGAGATGGTCGTGGAAGTGTACTGGGCGACGATTCATCAGCATGCGGCACCCATCCATTGGACAAGTGTGCAAGTGGGCCCCGTCTCTCGTCTCAACCACATTTTGTGAGGTCCGAAATTCCGAATCCACAGCACGCCACTTCAAAAGCATCTGCTGTCTCTCTCCCTTTTCTTTTCAATTCAAATTTGGACCCATTTCTCTCCTGTCTAAACCCGAACTAACCATGGTCGGAGTCGGGCCTGAAACTCCCAAATCCACCATCAAATTCCTCTGCAGCTATGGCGGCAAAATTCTCCCCCGCTACCCTGATGGCAAGCTCCGTTACCTCGGCGGCCAGACCCGTGTCCTCGCCGTTCCTCGCTCCATTTCTTTTTCGGACCTATTATTGAAGATGGGAGAGCTTTGTGGCTCTTCTGTTAGCCTTCGTTGCCAATTGCCCGCCGAAGATCTTGATGCTTTAGTTTCTATCACCTCCGACGAGGATCTAGCATATCTCATCGAGGAATATGATCGTGTTGCGTCCCCGCCCTCATCTTTAAAGATCAAAGCATTTCTTTCGCCGCCAAAATCACTCAACAAGGTTTCTTCCCCCTCCTCCTCGCAGTCGTCATCCTTGTCTACATCATCCTCTTCGTCGTCGTCGTCGTCGTCGTCTTCTTCTTCATTTCGCAGCCCTACTACTGCTTGTGGTTGTTCTGGTTTTGGTTCAAGCCCGAGGTATTCGGTGATGCCGCCCGTGGTCAACCGTTGCGTCCACCCGAGGTCGGCCCCGATGGTGTATACAAGTTGCATGGAGAAATCTGCTGAGAGGAATCTTGCTCTTCCCTACTATGCTTATCATGCTCAGGTTAACCCTGGCCACATTTACGTCATCGACAACGGGAACCACTGGCAATAG 915 0.5148 MPRQALRWSWKCTGRRFISMRHPSIGQVCKWAPSLVSTTFCEVRNSESTARHFKSICCLSPFSFQFKFGPISLLSKPELTMVGVGPETPKSTIKFLCSYGGKILPRYPDGKLRYLGGQTRVLAVPRSISFSDLLLKMGELCGSSVSLRCQLPAEDLDALVSITSDEDLAYLIEEYDRVASPPSSLKIKAFLSPPKSLNKVSSPSSSQSSSLSTSSSSSSSSSSSSSSFRSPTTACGCSGFGSSPRYSVMPPVVNRCVHPRSAPMVYTSCMEKSAERNLALPYYAYHAQVNPGHIYVIDNGNHWQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1002 304 CDD PB1_UP2 96 191 - -
Glsi09g1002 304 PANTHER OS05G0427100 PROTEIN-RELATED 88 251 - -
Glsi09g1002 304 MobiDBLite consensus disorder prediction 194 231 - -
Glsi09g1002 304 SMART PB1_new 107 194 IPR000270 GO:0005515
Glsi09g1002 304 MobiDBLite consensus disorder prediction 195 231 - -
Glsi09g1002 304 Pfam PB1 domain 109 191 IPR000270 GO:0005515
Glsi09g1002 304 Gene3D - 111 191 - -
Glsi09g1002 304 SUPERFAMILY CAD & PB1 domains 109 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1002 Glsi-ChrGlsi09 7033553 7038033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1002 93 191 MAP Kinase Kinase Kinase AT5G57610 48.485 5.94e-27 108