Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0990 ATGGCAGAGAGCTTGGACAGTGCAACCTCAGACCTTCTGTGTTCGGAGAAAAGTAATACATGCTTTGCTGATTTCGAATGTAACACCGCAGATGAGTCTGGAAAATCCCCTTCCTGGAACCACCAAAACACGAATGCTAACCATCATTGTCCGAGTTCGGACAGTCGTGGGTTGGAATCCTTCTTGGGTTTTCCGGTACAGAGTGAAGAAAGAGTCAGACTAATGGTTGAGAGGGAGAAAGAGCATATGCCCAGAGATGATTACCTGAAGAGATTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGCTCATGCCTATCATGGTTTTGGATCATTGAGCTTTTGTCTCTCCATCAACTACTTGGATCGGTTCCTATCAATATATGATTTACCTAGAGGTAAAGCTTGGACCGTGCAATTGTTAGCTGTAGCTTGTTTGTCAATAGCGTCCAAAATGGAGGAAACTAAAGTGCCTCTATCTGTAGATTTACAGGTTGGAGAACCAAAGTACGTATTTGAAGCTAAAACCATTCAAAGAATGGAGCTACTGGTATTAAGCGCACTGAGATGGAAAATGCAAGCTTGTACTCCATGCTCCTTCATAGACTACTTCCTCAGTAAAATAACGTACGAGCTACTTCCTGCAAAGTCACGCATTTCTAGATCAATACAGCTCATACTTTGTACAATCAGAGGTATTGACTTCTTGGAATTCAAGCCATCTGAAATTGCTGCTGCAGTGGCAATCTCCGTTTCAAGGGAACTGCAAGCAACTGAGATTGATAAGGCCATAACTTGTTTCGTGATTGTAGAAAAGGAGAGAGTTCTGAAGTGTGTTGAACTGATCAGGGACTTGTCCTTGGTTAGTGTTTCTGCTAATATGGTCAGTAACTCAGCGCCATTTGTGCCCCAAAGCCCTGTTGGGGTGCTGGAAGCTGCATGCTTGAGCTATAAAAGTGATGAATTGACGGTTGGGTCATGTCCAAATTCTTTAGACCTGATGGGACTTCCAAGTCATGAAATGTTAGGTGGTGGGGACTGGAACCATGGTCAGTGCCACTGCCCCTCTGAGTGA 1101 0.4432 MAESLDSATSDLLCSEKSNTCFADFECNTADESGKSPSWNHQNTNANHHCPSSDSRGLESFLGFPVQSEERVRLMVEREKEHMPRDDYLKRLRSGDLDLSVRREALDWIWKAHAYHGFGSLSFCLSINYLDRFLSIYDLPRGKAWTVQLLAVACLSIASKMEETKVPLSVDLQVGEPKYVFEAKTIQRMELLVLSALRWKMQACTPCSFIDYFLSKITYELLPAKSRISRSIQLILCTIRGIDFLEFKPSEIAAAVAISVSRELQATEIDKAITCFVIVEKERVLKCVELIRDLSLVSVSANMVSNSAPFVPQSPVGVLEAACLSYKSDELTVGSCPNSLDLMGLPSHEMLGGGDWNHGQCHCPSE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0990 366 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Glsi09g0990 366 Gene3D - 85 202 - -
Glsi09g0990 366 Pfam Cyclin, N-terminal domain 73 201 IPR006671 -
Glsi09g0990 366 MobiDBLite consensus disorder prediction 33 52 - -
Glsi09g0990 366 SMART cyclin_7 107 195 IPR013763 -
Glsi09g0990 366 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Glsi09g0990 366 Pfam Cyclin, C-terminal domain 205 296 IPR004367 -
Glsi09g0990 366 SUPERFAMILY Cyclin-like 186 296 IPR036915 -
Glsi09g0990 366 CDD CYCLIN_AtCycD-like_rpt2 205 291 - -
Glsi09g0990 366 SUPERFAMILY Cyclin-like 63 201 IPR036915 -
Glsi09g0990 366 PANTHER CYCLINS 69 293 IPR039361 -
Glsi09g0990 366 FunFam D2/4-type cyclin 85 198 - -
Glsi09g0990 366 FunFam D6-type cyclin 199 289 - -
Glsi09g0990 366 Gene3D - 75 290 - -
Glsi09g0990 366 SMART Cyclin_C_2 204 327 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0990 Glsi-ChrGlsi09 6935969 6939700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0990 62 272 Core Cell Cycle Gene Families AT5G65420 62.150 5.59e-94 280