Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0984 ATGGAGCCAGAAAAGGGCGCGGGATGCCAACTCGAGTCCGAACCCGAACACTTGGTCCGTACATGCGCGTCGCTTCTTCGTCACCGGCACTTCACCAGATGCCGCGAGTTCGCTCGCCGAGTTCCAAGGTCCGACCCAACGATCTCCGACTCCGTCGACCGAATACTCGCAATCGCCGACGTACTCCATGCTGCCGAGCGCCGCCTCAATAACAATCGCTTCGACTGGTATGCTATCCTCCAACTCCCCCGTGTGAACTCTGCAAACCGCCCACTCATGCGGAGTCAATTTAAGAGGTTCCTGCACCTCTTGAACCCAAACAGAAATGGGTTTGCATTCTCAAATGAAGCCTTCATGCTCGTCCGCGACGCCTGGCTCGTGCTTTCGGACCCACGAAAGAGAGCCCAATACGAACAGGAGATTCATGATTCCCCTCCCCCTGAACTTCGCAAACAGAGTGGGGACAAGCAAGACAGTTCTCGAGATGTGCCAGGGAATGGGCATAATGTGAATGTGGATGAACCAAAGTCGACATTTTGGACTGTGTGTCCTTACTGCTGGTTTTTGTACGAGTACGAGAAGATATATGAAGAATGCTGTTTGCGGTGCCAGAAATGCAGGAGGGCGTTTCACGGGGTAGCGGTGAAGCCTCCGGGGCCGGAGATGCTAGTGATGGGGAAGGAGAAGTACTATTGTTATTCCGCGCATGTACCTTTGAGATATCCGGCGTCACTTCATTCAACTGTGGACAAGGATTCGAAGAATAAGAATGTAAGAGCTTTTCGTGCAGAGCAAGCAGGCATTGAGGGATTGCATGGAGAGTTGGGAAAGAATGTGGGAGAGGGCATTCAGGGTAATCCGAGTTACGAAGAATGTGAGCCAGAGGGGAGTGGAAGAACAGAGTTCCAAAGCAATGGCAAGCGGCGGATGAGAGTAAAAACTGTCGCTAGAAATACAAAGAAGATTACTGGGAACAGGAGGAGATGTCAGGGACATATTTCACCAAATAGGGATGCTGAATTGTCGGATTTGGATGCAGAAGACGGTGATTAG 1053 0.5147 MEPEKGAGCQLESEPEHLVRTCASLLRHRHFTRCREFARRVPRSDPTISDSVDRILAIADVLHAAERRLNNNRFDWYAILQLPRVNSANRPLMRSQFKRFLHLLNPNRNGFAFSNEAFMLVRDAWLVLSDPRKRAQYEQEIHDSPPPELRKQSGDKQDSSRDVPGNGHNVNVDEPKSTFWTVCPYCWFLYEYEKIYEECCLRCQKCRRAFHGVAVKPPGPEMLVMGKEKYYCYSAHVPLRYPASLHSTVDKDSKNKNVRAFRAEQAGIEGLHGELGKNVGEGIQGNPSYEECEPEGSGRTEFQSNGKRRMRVKTVARNTKKITGNRRRCQGHISPNRDAELSDLDAEDGD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0984 350 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 12 325 - -
Glsi09g0984 350 MobiDBLite consensus disorder prediction 310 327 - -
Glsi09g0984 350 Gene3D DnaJ domain 58 155 IPR036869 -
Glsi09g0984 350 MobiDBLite consensus disorder prediction 136 162 - -
Glsi09g0984 350 MobiDBLite consensus disorder prediction 294 308 - -
Glsi09g0984 350 ProSiteProfiles dnaJ domain profile. 75 141 IPR001623 -
Glsi09g0984 350 Pfam DnaJ domain 75 138 IPR001623 -
Glsi09g0984 350 SMART dnaj_3 74 133 IPR001623 -
Glsi09g0984 350 CDD DnaJ 75 130 IPR001623 -
Glsi09g0984 350 MobiDBLite consensus disorder prediction 287 350 - -
Glsi09g0984 350 MobiDBLite consensus disorder prediction 136 170 - -
Glsi09g0984 350 SUPERFAMILY Chaperone J-domain 69 142 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0984 Glsi-ChrGlsi09 6904429 6905481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0984 14 247 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 33.460 2.31e-42 151